Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01159 ATGGGTAACGGGATTGGAAAGCTCTGCGTGTGTTTCACCGGAAACGGAGGTAACCTCCGGAAGCATGACATATCCGGTTTGATTTCAGACCCACTTGATGAAGGTATAGGTCACTCGTTCTGCTACGTTAGGCCCGACCCGTCTTGTATTTCTTCTTCTAAAGTTTACTCCGAGGAGACCACCACTTTTCGAACTATCTCCGGTGCTTCTGTGAGTGCTAACACTTCCACTCCTCTCTCTACGTCTTTTGTTGATCTGTATTCCTACAATAGCTTCGATAGAGCTGCGGCTTTTGAGAGCTCTACTTCTTTTGCTTCACTCCCTCTCCAACCAATGCCACGGAATTTGATGAATTCTGGTCAATTTTCGGGTAATCTGGTAGGGATTCCGGTTTCGTGGCCACTTGAGCGAGGATTCTTATCGGGTCCTATTGAGCGTGGATTTTTGTCAGGTCCACTTGATCGTGGTGGGTTGTTATCTGGTCCAATGGAAAACGGCAGCTCCGACCATTTTCAGAGAAGCTTCTCTCATGGCAATTCTGCTTTCAGACCAAGATCGAGAAGAGGGAAGTGGATTAAAACTCTTGAGAAAGCAATATCGAAAACCTTATCTCGTGGACACAACGCGATTGTTGCTCCCATTAGAAACTTCCATATGGTGAAAGAACCGGAGTGGATTGTTGGGTCAGAGAAGCACAATGAGAATTTGACTGTGAGCAGTTTAAATTTCAGCAGCGAGGGTAGCTTAGATGATGATGATTCGATGGAAAGTCAAAATCTTCAATGGGCTCAAGGAAAAGCAGGGGAAGACCGAGTCCATGTGGTTGTTTCGGAGGAACACGGTTGGGTTTTTGTTGGAATTTACGATGGATTCAACGGTCCTGATGCACCAGATTACCTTCTCTCACATCTCTACTCTGCTGTGCACAAAGAACTCAAAGGATTGTTGTGGGACGATAAGATTGAGCATTTGTCAGAGGTGATGATCTCTCCCACCTCCTCCATACCATCTGAAAATTGTAATTTTGAAAAGAACGATGTTTTGCAGACTAGTCACCATAGTGATGCTGTGAAAAATATGGCGATTGATTATAGTTCTCAATGTAATGTTGATGAAGAAGTTGATTCAAATTCAAATAGAAAGAGAGGTCACAGCTCCAAATATAATGGAGCACCAGAGAAATGGGAGGAGAATCATAAAAGGTGGAAGTGTGAATGGGATCGAGAAATATTAAAACTCGACAGAAGAGTAAAGGAAAAGCTAAATCGGCAATTATCAGATGGTACCGATAATATCAATCATTCCGAGGTATTAGAAGCACTTTCTCGTGCTCTGAGAAAAACAGAAGAGTCTTATCTAGATATTGCTGAAAAGATGGTAATGGAAAACCCTGAGCTAGCTTTGATGGGGTCTTGTGTGCTTGCAATGTTGATGAAAGGAGAAGATGTCTATGTTATGAATGTTGGTGACAGCAGAGCTGTTTTAGCTCAGAAGGTAGAGCCTACTTATTGGTTAGGGAAGATTCGCCAGGATTTGGAGAAAATCAATGAAGAGACAATGAATGATCTTGAATCGTCGGATGTTGAAAGAACAAACTTGGTACCTAGTCTTAATGCTGTTCAGCTGACCGTGGAACATAGTACCAGTGTGGAGAAGGAGGTTCGAAGAATTAGAAGCGAACACCCCGATGATCCTTGTGCTGTAATGAATGATCGTGTGAAGGGTTCCTTAAAGGTTACACGGGCTTTTGGTGCCGGGTTTCTCAAACAGCCAAAGTGTAACGATGCACTTTTGGAGAGGTTCAGAATAGCCTATGTTGGAACTTCTCCTTACATAACTTGCTCACCAGATCTGCGCCACCACAAATTGGGGTCAAAAGATAAATTTTTGATTTTATCTTCTGATGGACTTTATCAATACTTCACTAACAAAGAAGCCGTGGCTGAAGTCGAACTTTTCATCACACTGCAACCTGAGGGAGATCCTGCACAACACTTGGTTGAGGAACTGCTGTTCCGAGCTGCCAAAAAAGCTGGACTGGACTTCCATCAATTATTAGAAATACCACAAGGTGATCGACGTCGTTACCATGATGATGTTTCAATCATTGTGATCTCCTTGGAAGGAAGGATATGGAGATCCAGTGTCTAA 2151 0.4314 MGNGIGKLCVCFTGNGGNLRKHDISGLISDPLDEGIGHSFCYVRPDPSCISSSKVYSEETTTFRTISGASVSANTSTPLSTSFVDLYSYNSFDRAAAFESSTSFASLPLQPMPRNLMNSGQFSGNLVGIPVSWPLERGFLSGPIERGFLSGPLDRGGLLSGPMENGSSDHFQRSFSHGNSAFRPRSRRGKWIKTLEKAISKTLSRGHNAIVAPIRNFHMVKEPEWIVGSEKHNENLTVSSLNFSSEGSLDDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSHLYSAVHKELKGLLWDDKIEHLSEVMISPTSSIPSENCNFEKNDVLQTSHHSDAVKNMAIDYSSQCNVDEEVDSNSNRKRGHSSKYNGAPEKWEENHKRWKCEWDREILKLDRRVKEKLNRQLSDGTDNINHSEVLEALSRALRKTEESYLDIAEKMVMENPELALMGSCVLAMLMKGEDVYVMNVGDSRAVLAQKVEPTYWLGKIRQDLEKINEETMNDLESSDVERTNLVPSLNAVQLTVEHSTSVEKEVRRIRSEHPDDPCAVMNDRVKGSLKVTRAFGAGFLKQPKCNDALLERFRIAYVGTSPYITCSPDLRHHKLGSKDKFLILSSDGLYQYFTNKEAVAEVELFITLQPEGDPAQHLVEELLFRAAKKAGLDFHQLLEIPQGDRRRYHDDVSIIVISLEGRIWRSSV* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01159 716 CDD PP2Cc 429 707 IPR001932 -
Pte6g01159 716 MobiDBLite consensus disorder prediction 373 392 - -
Pte6g01159 716 ProSiteProfiles PPM-type phosphatase domain profile. 252 707 IPR001932 -
Pte6g01159 716 MobiDBLite consensus disorder prediction 374 392 - -
Pte6g01159 716 Pfam Protein phosphatase 2C 421 658 IPR001932 -
Pte6g01159 716 FunFam probable protein phosphatase 2C 4 227 712 - -
Pte6g01159 716 Coils Coil 438 458 - -
Pte6g01159 716 SMART PP2C_4 253 705 IPR001932 -
Pte6g01159 716 Gene3D - 230 713 IPR036457 -
Pte6g01159 716 PANTHER PROTEIN PHOSPHATASE 2C 250 705 IPR015655 GO:0004722|GO:0006470
Pte6g01159 716 SUPERFAMILY PP2C-like 266 708 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01159 Pte-Chr6 29748642 29752221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01159 1 717 PP2C-type Phosphatase Gene Family AT1G07630 66.347 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01159 - - qsa:O6P43_000210 1097.42