Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01155 ATGATGACGAGGGACCCATCGCAGGCAACCATGGATGTCAAAATCCATTCGCGTTCTGGGGACAACGTCGTACATCCGTTCGGTGATTCTACTTCCGTCTTACCACCGCCTCCGGGGAGGAGAACGCGGCCGTTTAGACCGCCACCGTCCGTTGTAGCACCCAACCAGGCAATGCCTGATGAGTTCAGACTATTTAAGAAGTGGTTTCCGTGGTTGGTGCCGTCGTTTGTGGTGGCCAACGTTGTACTGTTCATTATAGTTATGTATATAAACAATTGTCCCAAGAATTCCGGTAGTTCTTGTGTTGCTAGATATCTGGGGAGATTCTCTTTCCAACCCCTTAAAGAGAATCCTCTCTTCGGTCCTTCTTCATCTGCATTAGAGAAGATGGGTGCTCTAGAAGTGAATAAAGTGGTACATAGACACCAAGCGTGGCGCTTGATTTCTTGTATCTGGTTACATGCTGGGGTTATTCATGTCCTTGCAAATATGTTGAGTCTTGTTTTCATTGGCATCCGGCTTGAGCAAGAGTTTGGATTTGTTCGAATTGGACTGCTCTATATTATATCAGGTTTTGGTGGAAGTCTGCTATCAGCTCTTTTTATTCAGGCAGGCATCTCTGTTGGTGCCTCTGGTGCTCTTTTCGGATTGCTAGGGGGCATGCTGTCAGAGCTTATCACGAACTGGACAATATATGCCAATAAGATTGCTGCATTGTTGATACTTCTTGTAATAATCGTCATCAACTTAGCTGTGGGAATACTCCCTCATGTGGACAACTTTGCACATATTGGAGGATTTATTTCCGGGTTTCTTCTCGGATTTGTATTTCTGATTCGACCACAGTTTGGATGGGTTAGCCAAAGAAATGCTTCTTCAGGATTTACTGGAACTTCTGTCAAACCAAAGCACAAGCCGTACCAGTATGTTCTATGGGTCTTCTCATTTGTACTATTTGTTGCTGGATTGACCACTGGACTCGTATTGCTCCTCAGAGGAGTTAATATGAATGATCACTGTTCATGGTGTCACTATATGAGTTGTGTGCCAACGTCGAAATGGAGCTGCACATCCCAACAGGTTTATTGCGAGGAGTTGCCCTTGTGCAACTTCCCCACCCTCCTCCTTAAGTACTCTATTCCCTTCACTCTCCTCACATCCAATCCAACTCCACACCATAATACCACCTATCCCTTCCTTCCTTCCTTCCTAACTATTTCATCTTTGTCCGTTCATTTGTCTGTTTCCAACTTGAGGCAAATGGCAATACTAAAATTGCTTTGCATTGCATGTCTTATCTCAATGATATGGGTTGGACATGCTAGAATCCCTGGAGTCTTCACTGGGGGTGAATGGCAAAGTGCTCATGCTACTTTCTATGGTGGTGCTGATGCATCAGGCACAATGGGTGGAGCTTGTGGTTATGGAAACCTTTACAGCCAAGGTTATGGAGTGAACACTGCCGCATTGAGCACAGCACTATTCAATAATGGGTATAGCTGTGGTGCTTGCTTTGAGATAAAATGCGCAAATGATCCAACCTGGTGTCACTCAGGCAGCCCTTCCATTTTTATTACAGCCACTAACTTCTGCCCACCGAACTATGCTCTCCCAAACGACAATGGTGGATGGTGCAACCCTCCTCGCCCACACTTTGACCTCGCCATGCCCATGTTCCTCAAGATTGCTGAATACCGCGCTGGTATCGTCCCCGTTGCGTATCGCAGGGTGCCATGTCGTAAGCGAGGAGGGATCCGATTCACAATCAACGGCTTCCGTTACTTCAACCTGGTTTTGATCAGCAACGTCGCTGGTGCAGGAGATGTCGTGAGGGTTTACGTGAAGGGCTCGAGAACCGGTTGGATGCCCATGAGCCGGAATTGGGGTCAGAATTGGCAGTCAAACGCTGTCTTGGTGGGCCAGTCCTTGTCTTTTCGTGTGGCAAGCAGTGATAGGCGCAGCTCTACATCATGGAACATAGCCCCAGCCAATTGGCAATTCGGTCAAACTTTTACCGGCAAGAATTTTAGGGTTTGA 2037 0.4688 MMTRDPSQATMDVKIHSRSGDNVVHPFGDSTSVLPPPPGRRTRPFRPPPSVVAPNQAMPDEFRLFKKWFPWLVPSFVVANVVLFIIVMYINNCPKNSGSSCVARYLGRFSFQPLKENPLFGPSSSALEKMGALEVNKVVHRHQAWRLISCIWLHAGVIHVLANMLSLVFIGIRLEQEFGFVRIGLLYIISGFGGSLLSALFIQAGISVGASGALFGLLGGMLSELITNWTIYANKIAALLILLVIIVINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRNASSGFTGTSVKPKHKPYQYVLWVFSFVLFVAGLTTGLVLLLRGVNMNDHCSWCHYMSCVPTSKWSCTSQQVYCEELPLCNFPTLLLKYSIPFTLLTSNPTPHHNTTYPFLPSFLTISSLSVHLSVSNLRQMAILKLLCIACLISMIWVGHARIPGVFTGGEWQSAHATFYGGADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGYSCGACFEIKCANDPTWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKRGGIRFTINGFRYFNLVLISNVAGAGDVVRVYVKGSRTGWMPMSRNWGQNWQSNAVLVGQSLSFRVASSDRRSSTSWNIAPANWQFGQTFTGKNFRV* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01155 678 SUPERFAMILY PHL pollen allergen 581 673 IPR036749 -
Pte6g01155 678 PRINTS Expansin signature 509 520 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 630 651 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 542 559 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 482 496 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 595 616 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 659 675 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 559 572 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 583 595 IPR002963 GO:0009664
Pte6g01155 678 PRINTS Expansin signature 523 533 IPR002963 GO:0009664
Pte6g01155 678 FunFam Expansin 441 580 - -
Pte6g01155 678 Pfam Rhomboid family 139 280 IPR022764 GO:0004252|GO:0016020
Pte6g01155 678 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 470 584 IPR007112 -
Pte6g01155 678 CDD DPBB_EXPA_N 451 579 - -
Pte6g01155 678 MobiDBLite consensus disorder prediction 18 52 - -
Pte6g01155 678 PANTHER RHOMBOID-RELATED 54 357 IPR002610 GO:0004252|GO:0006508|GO:0016020
Pte6g01155 678 Gene3D - 440 580 IPR036908 -
Pte6g01155 678 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 594 673 IPR007117 -
Pte6g01155 678 FunFam RHOMBOID-like protein 66 280 - -
Pte6g01155 678 PRINTS Expansin/Lol pI family signature 567 583 IPR007118 GO:0005576
Pte6g01155 678 PRINTS Expansin/Lol pI family signature 469 487 IPR007118 GO:0005576
Pte6g01155 678 PRINTS Expansin/Lol pI family signature 621 635 IPR007118 GO:0005576
Pte6g01155 678 PRINTS Expansin/Lol pI family signature 451 466 IPR007118 GO:0005576
Pte6g01155 678 PRINTS Expansin/Lol pI family signature 491 509 IPR007118 GO:0005576
Pte6g01155 678 PRINTS Expansin/Lol pI family signature 659 673 IPR007118 GO:0005576
Pte6g01155 678 Gene3D - 584 676 IPR036749 -
Pte6g01155 678 SUPERFAMILY Rhomboid-like 68 282 IPR035952 -
Pte6g01155 678 SUPERFAMILY Barwin-like endoglucanases 429 602 IPR036908 -
Pte6g01155 678 MobiDBLite consensus disorder prediction 31 52 - -
Pte6g01155 678 Pfam Lytic transglycolase 487 574 IPR009009 -
Pte6g01155 678 Pfam Expansin C-terminal domain 585 662 IPR007117 -
Pte6g01155 678 Gene3D - 65 280 IPR035952 -
Pte6g01155 678 FunFam Expansin 584 676 - -
Pte6g01155 678 SMART dpbb_1 487 574 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01155 Pte-Chr6 29682850 29695491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01155 421 679 Expansin Gene Family AT2G39700 81.467 2.51e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01155 - - vvi:100241704 511.146