Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01141 ATGGCTGAGATCTGTTGCGGAATGGTAAGTGAAAACAAGTCGTCATCGTCGTCAGGGACTTGTGCCGAGCAAGGTTCAAGGGCGGCAAGGCAGAGGCGAATGGAAATCAGACGCGTAAAATTTGTGAACGGGGTTACTCAGGCGAAAGCTGAATCAGAGTCTGAGGACATGAGGCAGAAGAAAGCAGGGGCTAGCCCTTCGTCTTTGTCACGAGATTGTGATAATGCTCTAGAGAACTGTGATGAAGATGGTGTCATGTCGGTTGCGAAGTCGGAACATGAGAGACCCGATACTAGAGTTAACAAAGTTACGGTTTTTCAGTTATCATTGCCGGCCGACGTTATTGTGACCCAGTATCCCAAGTTTGGGGTTGCATCTATCTGTGGAAGGAGGAGAGAGATGGAGGATGCTGTGGCCTTGCACCCTTTCTTCTACCGGGACCACTTTGACCCCACCAGCGAGTTGCACTACTTCGGAGTGTATGATGGCCATGGCTGTTCTCATGTGGCAACGAAGTGTAGGGAAAGGTTACATGAACTGGTGAAGAAGGAGCTGGAGAGCTTTGGGGAGTTGTCAATGGGGTGGAAAGGCGCGATGGAGCGAAGCTTTTCAAAGATCGACAAGGAGGTAATTGCTTGGAACGGGAATGTTTTGGGAGCCAAATGCAAATGTGAGCTTCGATCACCTGAGTGTGACGCCGTTGGATCCACAGCTGTTGTTTCCGTTTTGACTCGCGATAAGATCATTATAGCCAATTGTGGCGATTCTAGAGCCGTCCTTTGCCGAAATGGCAAGGCCATAGCTCTCTCTTCCGATCACAAGCCGGATCGTCCCGACGAGTTAGACAGAATTCAAGCTGCCGGTGGGAGAGTCATATACTGGGAGGGAGCACGAGTTTTGGGAATGCTAGCCATGTCAAGAGCCATAGGTGATAATTATTTGAAGCAGTACGTAACATCTGAACCAGAAGTAACGATTACTGAAAGAACAGCCGAAGATGAGTGTTTAATATTGGCAAGTGATGGGCTGTGGGACGTGGTGTCGAACGAGACCGCATGTGGAGTAGCTTGTACATGCTTGAGGGGGAAAGCACAAGCGCCACCGAGTATGGTCGAAGAAATTGTGCAACTTAGTGAGAGTTGTTTATCGGAATCACTGGACAAGGCGTGCTTGGATGCGTCCACGTTGCTGACTAAATTAGCATTGGCAAGGCATAGTACTGACAACATCAGTGTGGTCGTCGTGAATCTGAGGAGAGACACGTAG 1266 0.4929 MAEICCGMVSENKSSSSSGTCAEQGSRAARQRRMEIRRVKFVNGVTQAKAESESEDMRQKKAGASPSSLSRDCDNALENCDEDGVMSVAKSEHERPDTRVNKVTVFQLSLPADVIVTQYPKFGVASICGRRREMEDAVALHPFFYRDHFDPTSELHYFGVYDGHGCSHVATKCRERLHELVKKELESFGELSMGWKGAMERSFSKIDKEVIAWNGNVLGAKCKCELRSPECDAVGSTAVVSVLTRDKIIIANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWEGARVLGMLAMSRAIGDNYLKQYVTSEPEVTITERTAEDECLILASDGLWDVVSNETACGVACTCLRGKAQAPPSMVEEIVQLSESCLSESLDKACLDASTLLTKLALARHSTDNISVVVVNLRRDT* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01141 421 MobiDBLite consensus disorder prediction 9 25 - -
Pte6g01141 421 FunFam Protein phosphatase 2C 50 119 421 - -
Pte6g01141 421 SUPERFAMILY PP2C-like 119 418 IPR036457 -
Pte6g01141 421 SMART PP2C_4 108 415 IPR001932 -
Pte6g01141 421 ProSiteProfiles PPM-type phosphatase domain profile. 121 417 IPR001932 -
Pte6g01141 421 CDD PP2Cc 121 417 IPR001932 -
Pte6g01141 421 Pfam Protein phosphatase 2C 122 409 IPR001932 -
Pte6g01141 421 MobiDBLite consensus disorder prediction 47 73 - -
Pte6g01141 421 PANTHER PROTEIN PHOSPHATASE 64 417 IPR015655 GO:0004722|GO:0006470
Pte6g01141 421 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Pte6g01141 421 Gene3D - 112 421 IPR036457 -
Pte6g01141 421 SMART PP2C_SIG_2 140 417 IPR001932 -
Pte6g01141 421 MobiDBLite consensus disorder prediction 9 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01141 Pte-Chr6 29527469 29530736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01141 120 419 PP2C-type Phosphatase Gene Family AT1G07430 62.696 1.76e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01141 K14497 - qsa:O6P43_028182 529.635