Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01140 ATGGAGACGAAGTCTGGGAATCCGGAGCCGGCATCCCACAACCCATCCCAACCGGCAAAGATAAGGTGGGGAGAGCTCGACGAAGATGATGGAGAGGATCTTGATTTTCTGCTGCCACCAAAGCAGGTGATAGGTCCAGATGAGCACGGGATTAAGAAGGTGATTGAGTACAAGTTCAATGACGAAGGAAACAAGGTTAAGATCACCACTACCACACGTATTCGCAAACTCGCTAACGCTCGTTTGAGCAAGGGTGCCGTTGAGAGGCGCTCCTGGGCGAAGTTTGGTGATGCTGTACATGAAGATGTTGGTAGTCGTCTAACCATGGTCTCTACTGAAGAAATCGTCCTCGAACGACCTAGAGCTCCTGGTAGCAAACCGGAGGAGATGAAGGTTCAATCAGATTCCTTGGCACAAATGGGGAAAGGTGCTGTTCTTATGGTTTGTAGAACATGCGGTAAGAAGGGTGACCACTGGACTTCAAGGTGCCCTTACAAGGATCTCTCCCAACCAGTTGAGTCCTTCATGGATAAGCCTGCTGCAGCAGATACTGCTGCTACAGGTGCAACTAAGGGTACATATGTTCCTCCTGGCATGAGAGGAGGTGGTGCTGAGAGGACTGGATCTGAAATGAGACGCAGGAATGATGAAAATTCGGTCCGGGTCACCAATCTGTCAGAAGACACCAGAGAACCTGATCTGCTGGAACTTTTCCGGTCTTTTGGTGCTGTAAGTAGAGTGTATGTTGCTGTGGATCAGAAGACTGGCATGAGCAGAGGTTTTGGCTTTGTTAACTTTGTGAATAGGGAGGATGCTCAAAGAGCTATCAGCAAGCTCAATGGCTATGGTTATGACAATCTCATTCTGAGAGTTGAGTGGGCCACCCCCAGAACAAATTAG 900 0.49 METKSGNPEPASHNPSQPAKIRWGELDEDDGEDLDFLLPPKQVIGPDEHGIKKVIEYKFNDEGNKVKITTTTRIRKLANARLSKGAVERRSWAKFGDAVHEDVGSRLTMVSTEEIVLERPRAPGSKPEEMKVQSDSLAQMGKGAVLMVCRTCGKKGDHWTSRCPYKDLSQPVESFMDKPAAADTAATGATKGTYVPPGMRGGGAERTGSEMRRRNDENSVRVTNLSEDTREPDLLELFRSFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAISKLNGYGYDNLILRVEWATPRTN* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01140 299 CDD eIF3G 50 167 IPR024675 -
Pte6g01140 299 PIRSF Transl_init_eIF-3_RNA-bind 13 299 IPR017334 GO:0003743|GO:0005737|GO:0005852
Pte6g01140 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 220 286 IPR000504 GO:0003723
Pte6g01140 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 218 296 IPR000504 GO:0003723
Pte6g01140 299 Gene3D - 182 299 IPR012677 -
Pte6g01140 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 27 295 - -
Pte6g01140 299 SUPERFAMILY RNA-binding domain, RBD 216 298 IPR035979 GO:0003676
Pte6g01140 299 MobiDBLite consensus disorder prediction 1 26 - -
Pte6g01140 299 SMART rrm1_1 219 292 IPR000504 GO:0003723
Pte6g01140 299 Pfam Eukaryotic translation initiation factor 3 subunit G 42 168 IPR024675 -
Pte6g01140 299 FunFam Eukaryotic translation initiation factor 3 subunit G 182 299 - -
Pte6g01140 299 MobiDBLite consensus disorder prediction 188 217 - -
Pte6g01140 299 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 20 298 IPR017334 GO:0003743|GO:0005737|GO:0005852
Pte6g01140 299 CDD RRM_eIF3G_like 219 294 IPR034240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01140 Pte-Chr6 29516618 29518892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01140 19 297 Eukaryotic Initiation Factors Gene Family AT3G11400 67.732 1.05e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01140 K03248 - cit:102611620 485.337