Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01136 ATGGGAGCTCGTTGCTGTAAGTTCTCACTATGCTGGTGGCCTTCACATGTCAAACCAAATCTTCATGCCTCCTCTGATATGGATGATGATTGCAAGAATAAGAATGGAAAGGATTCTTTGCCCGGGTTCAATGAGTACAGATTGAACCAGCTAAGAGAAGCTACTTGTGGATTTTCCCCAGACAACATAGTATCAGAGCATGGTGAGAAAGCCCCGAATGTTGTTTACAAAGGAAAGCTTGAAGGCGATGATAGGTGGGTCGCAGTTAAGCGCTTCAACAGGTCAGCATGGCCTGATCCTAGACAGTTCTTGGCGGAGGCAAGGGCTGTCGGGCAGTTGAGGAACGAGAAGCTGGCTAATCTGATTGGATGTTGCTGTGAAGGTGAAGAGCGATTACTGGTTGCAGAGTTCATGCATAATGAAACTCTTTCTAAGCATCTTTTTCATTGGGAGACTCAGCCCATGAAATGGACAATGAGGCTGAGAGTAGCTCTGTACTTGGCACAAGCATTGGAAAATTGCAGTAGTAGAGGGAGGGCCCTGTACCATGATCTTAATGCGTACAGAATTCTGTTTGATCAGGATGGCAATCCAAGGCTGTCCTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAAAGTTACAGTACAAATTTAGCTTTCACTCCTCCAGAGTACTTGAGAACAGGAAGAATTACACCAGAAAGTGTGGTTTACAGTTTTGGTACTCTCTTACTTGATCTTCTCAGTGGCAAACATATTCCTCCGAGCCATGCACTTGATCTGATACATGGAAAAAAATTTCAGATGCTGATGGATTCATGTTTAGTGGGTCATTTCTCAAATGATGATGGAACTGAGTTAGTAAGGTTAGCTTCACGTTGTCTACAATATGAAGCCCGTGAGAGGCCAAGTGCCAAGTCACTTGTAGCTGCTCTAACTCCACTTCAACAGGAAACTGGTGTCCCATCATATGTATTATTGGGCATACCTCTTGCAAGTAAAATGTCGGAGCCAAAGATACTTTCGTTAACACCTCTAGCGGAAGCCTGTTCAAGAGGGGATCTCACAGCAATTCATGAAAGTCTGGAAAAGCTGGGATATAAGGATGATGATGGAGTTGCAAATGAGCTTTCCTTCCAGATGTGGACAAATCAAATACAAGAAACACTGAATTCTAAGAAGCGTGGAGACTCAGCTTTTCGAGCTAAGGACTTCTCTACAGCCATTGAGTGCTATACGCAATTCATCGAAGGAGGGACCATGACATCGCTAACCGTGTATGCTAGGCGATGCCTATGCTATCTAATGGCTAATCTTCCCCAAGAAGCTCTTGCAGATGCTATGCAAGCGCAAACAGTGTCGCCCGAATGGCCAACTGCATTTTACCTTCAAGCAGCCGCCTTATTCAGCATAGGGATGAATAATGATGCCCTAGAAAGTCTGAAAGATGGTAAATCACTGGAAGCAAAGAAAACGTAG 1482 0.4447 MGARCCKFSLCWWPSHVKPNLHASSDMDDDCKNKNGKDSLPGFNEYRLNQLREATCGFSPDNIVSEHGEKAPNVVYKGKLEGDDRWVAVKRFNRSAWPDPRQFLAEARAVGQLRNEKLANLIGCCCEGEERLLVAEFMHNETLSKHLFHWETQPMKWTMRLRVALYLAQALENCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIHGKKFQMLMDSCLVGHFSNDDGTELVRLASRCLQYEARERPSAKSLVAALTPLQQETGVPSYVLLGIPLASKMSEPKILSLTPLAEACSRGDLTAIHESLEKLGYKDDDGVANELSFQMWTNQIQETLNSKKRGDSAFRAKDFSTAIECYTQFIEGGTMTSLTVYARRCLCYLMANLPQEALADAMQAQTVSPEWPTAFYLQAAALFSIGMNNDALESLKDGKSLEAKKT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01136 493 SUPERFAMILY TPR-like 394 485 IPR011990 GO:0005515
Pte6g01136 493 Gene3D Phosphorylase Kinase; domain 1 31 137 - -
Pte6g01136 493 Gene3D Transferase(Phosphotransferase) domain 1 139 329 - -
Pte6g01136 493 Pfam Protein tyrosine and serine/threonine kinase 74 313 IPR001245 GO:0004672|GO:0006468
Pte6g01136 493 SUPERFAMILY Protein kinase-like (PK-like) 65 319 IPR011009 -
Pte6g01136 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 492 IPR045845 GO:0004672|GO:0009742
Pte6g01136 493 FunFam probable serine/threonine-protein kinase At4g35230 388 493 - -
Pte6g01136 493 ProSiteProfiles Protein kinase domain profile. 61 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01136 493 Gene3D Tetratricopeptide repeat domain 388 493 IPR011990 GO:0005515
Pte6g01136 493 FunFam probable serine/threonine-protein kinase At4g35230 33 137 - -
Pte6g01136 493 FunFam probable serine/threonine-protein kinase At5g41260 139 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01136 Pte-Chr6 29441801 29446180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01136 46 313 Glycoside Hydrolase AT3G07070 33.793 8.71e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte6g01136 PK_Tyr_Ser-Thr 5.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01136 - - vvi:100256923 816.609