Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01133 ATGGCTTCTATACCTCTCACTACCTCAACCTCCTCGCCTACCTTACCGTTTCTCCGATCACGGGCACTTTCTTCGAAACAAACGCCGTTCTCTAGCTCCACCTTACGATTCCGTTCTTCTTTAACTTACAAACGTTTTCAATATTTTAGCTCGAGCTCGATCTCGCCAACTACATCTTTGAAACTCGCGAGGTTTGCTTTCGAGTCTAAGTGTAGTAGGAGAGATGATGTTGTTGTTAGAGCCGCTGCATCTGGTGGCGCTTCTTCAGCTACACCGGCAACAATCCAGCAGCCATGGCAAGGGGCGGCATTGAAACCGTTGTTGGCTTCGATTGTTACTGGAGTCTTGCTCTGGTTTGTCCCGGTGCCTTCTGGTGTTTCTAAGAACGCGTGGCAATTGTTGGCTATTTTCTTGGCTACCATCGTCGGCATTATCACTCAACCATTGCCACTGGGTGCTGTAGCTCTGTTGGGTTTGGGTGCTTCAGTGGTCACCAAAACTCTGACTTTTGCCGCTGCATTCTCTGGTTTTGGTGATCCAATCCCATGGCTTATTGCCTTGGCCTTCTTCTTTGCCAGAGGTTTTATCAAAACCGGTTTAGGTAATAGAATCGCGTATCAGTTTGTCTCTTTGTTTGGCAGTTCATCCTTGGGATTAGGCTACAGTTTGGTGTTCAGTGAGGCATTGTTGGCCCCCGCAATACCTTCGGTTTCGGCAAGAGCTGGTGGAATTTTTCTCCCACTTGTGAAATCATTGTGTGTAGCCTGTGGTAGTAATGTTGGCGATGGTACCGAAGAAAAACTAGGGTCCTGGTTGATGCTGACCTGCTTTCAGACTTCAGTGATCTCGTCGGCCATGTTTCTTACGGCAATGGCAGCGAATCCTTTATGTGTGACATTGACTTCTAACGCAATAAACAAGACAATTGGGTGGACCGATTGGGCTATAGCCGGAATTGTACCTGGATTGGTGTCACTGATTGTCGTCCCTATGATTTTGTATGTGATTTACCCGCCAAAAGTGAAAACTAGTCCTGATGCTCCTCGGCTTGCTAGAGAGAAGCTGGAGAAAATGGGACCCATGACCACGAACGAGAAGATCATGGCTGTTACTCTGCTATTGACGGTCGGTCTCTGGGTTTTCGGAGCGATGTTAAATGTCGATGCCGTGACATCTGCTATTTTGGGATTATCTGTACTTCTTGTCACTGGTGTTGTGACATGGAAGGAATGCTTGGCCGAGGGTGTTGCTTGGGACACCCTTACATGGTTTGCAGCACTCATTGCCATGGCCGGGTATCTGAATAAATATGGTCTCATTTCCTGGTTCAGCCAAACAGTAGTAAAGTTTGTGGGTGGACTAGGTCTTTCATGGCAATTATCTTTTGGCATCTTGGTTCTTCTCTACTTCTATTCTCACTACTTCTTTGCAAGTGGTGCTGCCCATATCGGTGCAATGTTCACTGCTTTCTTGTCCGTTGCTTCTGCTCTTGGGACTCCACCATTATTCGGAGCAATGGTGCTATCCTTCCTCTCCAACCTGATGGGCGGCCTTACTCACTATGGAATTGGGTCTGCACCGGTTTTCTATGGTGCTAATTACGTTTCTCTTGGCAAATGGTGGGGATATGGATTTCTCATCAGCATTGTCAACATCATTATCTGGCTTGGAGTAGGAGGTGCTTGGTGGAAGTTCATTGGCCTCTGGTAA 1710 0.4725 MASIPLTTSTSSPTLPFLRSRALSSKQTPFSSSTLRFRSSLTYKRFQYFSSSSISPTTSLKLARFAFESKCSRRDDVVVRAAASGGASSATPATIQQPWQGAALKPLLASIVTGVLLWFVPVPSGVSKNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVVTKTLTFAAAFSGFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEEKLGSWLMLTCFQTSVISSAMFLTAMAANPLCVTLTSNAINKTIGWTDWAIAGIVPGLVSLIVVPMILYVIYPPKVKTSPDAPRLAREKLEKMGPMTTNEKIMAVTLLLTVGLWVFGAMLNVDAVTSAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPLFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVSLGKWWGYGFLISIVNIIIWLGVGGAWWKFIGLW* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01133 569 NCBIfam DASS family sodium-coupled anion symporter 121 563 IPR001898 GO:0016020|GO:0022857|GO:0055085
Pte6g01133 569 Pfam Sodium:sulfate symporter transmembrane region 106 569 IPR001898 GO:0016020|GO:0022857|GO:0055085
Pte6g01133 569 CDD ArsB_NhaD_permease 141 563 - -
Pte6g01133 569 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 75 569 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01133 Pte-Chr6 29380854 29384678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01133 1 568 Antiporters AT5G12860 77.138 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01133 - - qsa:O6P43_000146 878.241