Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01132 ATGAGGAAACCAGAACCAACAACTGGGAAAAACAGTAACTCCAACATCAAGCTTAGGAAGGGGTTGTGGTCACCTGAGGAAGATGACAAACTCATGAGATACATGCTAAACAATGGGCAAGGTTGTTGGAGTGATGTAGCTAGAAACGCTGGTCTGCAGAGGTGTGGAAAAAGCTGTCGCCTTAGATGGATCAATTACTTAAGGCCTGATCTAAAGCGTGGAGCATTTTCAACCCAAGAAGAGGAACTCATTATCCATTTGCATTCCCTACTTGGCAATAGATGGTCTCAGATAGCCGCGCGATTGCCAGGGAGAACAGATAACGAAATAAAGAATTTCTGGAATTCAAGCATTAAGAAAAGACTGAAGGAATTATCATCACCAAACACTAGTGATTCATGTCCATCAGATCCTAGAGATGTTAGTACCGGAGACTCCATTTCCATGGCAGAACATAGCACGACAACTTTCTACATGAACTCATCTCCATCATCTTCAACCCAATTGCCAAACGCAGTTCTCAGCCACGTGACGATGGATTCATTTCCTCTGCTAGACCATGAAAGTCTAAACATGTCATCAAGTAATGCAGCTGGATATGTCTTCAGTACAATCCCATGCCCACAAAATGGAGGTGGCATCATCACCGATAGTACTTTCTACAATGGAATCTTGGGGGGAGTGGATATTAGGGCAGAAACAGATATCGTTTCTGCTCACCTAGAGAATGATACCACCGAAGACAACCTTAACGTCGAACGCACGCCTGTCCGAATAACCAGTCATAACTGCAATTACTTCAGTAACGTAAATATAAACAATATCATCAACACTTGCAATGACGAAGTTAGTAAAGCCACTGAGGACATGTCTGGGGTTGGGAATTACTTTCAGGAAGAGTTAACAATGGGAGAATGGGACTTGGAAGAATTAATGAAAGATATTTCATCCTTTCCCTTTGTTGATTCCCAGTTCAGTAGCTACTAA 987 0.4245 MRKPEPTTGKNSNSNIKLRKGLWSPEEDDKLMRYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSTQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSSIKKRLKELSSPNTSDSCPSDPRDVSTGDSISMAEHSTTTFYMNSSPSSSTQLPNAVLSHVTMDSFPLLDHESLNMSSSNAAGYVFSTIPCPQNGGGIITDSTFYNGILGGVDIRAETDIVSAHLENDTTEDNLNVERTPVRITSHNCNYFSNVNINNIINTCNDEVSKATEDMSGVGNYFQEELTMGEWDLEELMKDISSFPFVDSQFSSY* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01132 328 Gene3D - 74 138 - -
Pte6g01132 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Pte6g01132 328 FunFam MYB transcription factor 17 73 - -
Pte6g01132 328 SMART sant 72 120 IPR001005 -
Pte6g01132 328 SMART sant 19 69 IPR001005 -
Pte6g01132 328 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Pte6g01132 328 FunFam Myb transcription factor 75 122 - -
Pte6g01132 328 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Pte6g01132 328 CDD SANT 75 115 IPR001005 -
Pte6g01132 328 MobiDBLite consensus disorder prediction 125 146 - -
Pte6g01132 328 PANTHER MYB DOMAIN PROTEIN 55 14 255 - -
Pte6g01132 328 Gene3D - 17 73 - -
Pte6g01132 328 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Pte6g01132 328 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Pte6g01132 328 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Pte6g01132 328 CDD SANT 23 67 IPR001005 -
Pte6g01132 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01132 Pte-Chr6 29367498 29369258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01132 1 324 MYB Transcription Factor Family AT3G08500 42.149 2.36e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte6g01132 Myb_DNA-binding 3.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01132 K09422 - qsa:O6P43_000145 350.132