Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01128 ATGAATAGGTCAGGCTGCGGAAGTAGTTTCTTTTCTGGTTCGAATGGGGGAGTTTTGGACCTAGAGTCTCCTTTTGGCATACATCAACATAGTCGCATGGCTCACCATTCACTAAATCCTCAGCATCAGATAAGGATAATGAGTGGTATTGATAATGATCGTATGCCAATCGGGTCAATGGAAATTAAAGGCTCAAACTCAATGTCGAGTTTTGGGAGAGGAAAGGCTGTCAGTCCCTCCAATGTGGGAGATGATAATGATTTGAGTGAGGAGGATGACCCAGGCTTCAATGAAGATGGGACTGGTGAAAACACTGATGTGATGAAGGGTAAAAAAGGATCTCCTTGGCAGCGAATGAAATGGACTGATAATGTGGTTAGGCTTCTTATTGCAGTGGTGGCTTGTGTTGGAGACGATGGTACACTTGATGGCGGTGATGGTCTGAAAAGAAAATCTGGGGTCTTACATAAGAAGGGCAAGTGGAAAACAGTGTCCAAGATAATGATCAGTAAGGGTTGTCATGTATCTCCACAGCAATGTGAAGACAAGTTCAATGATTTGAATAAGAGGTACAAGAAGTTGAATGATATTCTTGGGAGGGGAACCAGTTGTAGAGTGGTGGAGAACCCTTGTCTCATGGACTCAATGCCTCATCTGTCAGCTAAGGCGAAAGATGATGTCAGAAAGATTTTGAGCTCAAAACATTTGTTTTATAAGGAAATCTGTGCTTACCACAACGGCCAAAGGATACCCGATTGTCAAGATCTCGACCTGCAGGGTTATTCTATGTATTTTGGGAGCAGCTCAAAAGACAATGGGTCAGATGAGGAAGAACGAGAAGAAAACAATGAAACTGACGACAATGACTCCAATAACGAAGATAATAGCAATGTCCAAGGTGTTGCAGAGAGACCAGGGGCATGTAGTGGTAAAAAGGAGATTCATGAAGATGATGGCTATTTCTGGCCACCGTCAGTTGCTCACGATCAGTTTGAATTTGAAATGGCTAGGATATTTCAAGACCCTGCGGTATCAATGAGGGAAAGACAGGAATGGATACAGAAGCAGAGTTTACTTCTCCAAGAGCAAAGAGTTAGCTACCAAGCTGAAGCCCTTGAGCTTGAGAAACAACGCTTCAAGTGGCTAAGATACTGCAGCAAGAAAGACAGAGAGATGGAAAGGTTGAGGTTAGAAAATGAGAGAAAGAGACTAGAAAATGATCAGAAAATGTTACAGTTGCGGCAGAATGAGCTTGAGATGGATCTACACAAGTAA 1275 0.4282 MNRSGCGSSFFSGSNGGVLDLESPFGIHQHSRMAHHSLNPQHQIRIMSGIDNDRMPIGSMEIKGSNSMSSFGRGKAVSPSNVGDDNDLSEEDDPGFNEDGTGENTDVMKGKKGSPWQRMKWTDNVVRLLIAVVACVGDDGTLDGGDGLKRKSGVLHKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKKLNDILGRGTSCRVVENPCLMDSMPHLSAKAKDDVRKILSSKHLFYKEICAYHNGQRIPDCQDLDLQGYSMYFGSSSKDNGSDEEEREENNETDDNDSNNEDNSNVQGVAERPGACSGKKEIHEDDGYFWPPSVAHDQFEFEMARIFQDPAVSMRERQEWIQKQSLLLQEQRVSYQAEALELEKQRFKWLRYCSKKDREMERLRLENERKRLENDQKMLQLRQNELEMDLHK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01128 424 Pfam Myb/SANT-like DNA-binding domain 118 209 IPR044822 -
Pte6g01128 424 Coils Coil 385 421 - -
Pte6g01128 424 Gene3D - 121 193 - -
Pte6g01128 424 MobiDBLite consensus disorder prediction 267 310 - -
Pte6g01128 424 MobiDBLite consensus disorder prediction 85 99 - -
Pte6g01128 424 PANTHER F16F4.11 PROTEIN-RELATED 5 422 - -
Pte6g01128 424 MobiDBLite consensus disorder prediction 62 76 - -
Pte6g01128 424 MobiDBLite consensus disorder prediction 277 291 - -
Pte6g01128 424 MobiDBLite consensus disorder prediction 55 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01128 Pte-Chr6 29342801 29345370 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte6g01128 Myb_DNA-bind_4 2.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01128 - - jre:108998738 533.872