Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01123 ATGCATCATCGTCTAATATTACGATTATGCTTTCGTATTTCTACATTTTTGACTCCTTGCTACATGATAGTTTTAAAGAAAATGGACCATGACAAGACTGGATGCCAAGCTCCCCCTGAAGGTCCTATCTTGTGCGTCAACAACTGTGGCTTTTTTGGGAGTCCAGCTACGATGAACATGTGTTCCAAATGCCACAAAGACATGATGCTAAAACAAGAGCAGGCGAAACTTGCTGCCTCTTCTATTGGGAGTATTGTAAATGGATCCTCAAGTAGTATTGAGGATGATCCCGTTGCTACTGCTAATGTATATATTCCAGTCAGTCCGGTGGAATCTAAAGTTGTATCTTCTCAGACGTTGTTGGCTTCAACTTCAGAGGAAAGTGCAGTGGAAAAGCCCAAGGAGGGTCCCAGACGCTGCACCAGTTGCAATAAGCGTGTTGGATTAACTGGGTTCAACTGTCGGTGCGGTAATATTTTCTGTGCTGTACACCGCTATTCCGAGAAGCATGACTGCCCATTTGATTACCGTACTGCTGGAAGGGATGCAATAGCTAAAGCAAACCCTGTCGTCAAGGCTGAGAAGCTTGATAAGATCTAG 600 0.4417 MHHRLILRLCFRISTFLTPCYMIVLKKMDHDKTGCQAPPEGPILCVNNCGFFGSPATMNMCSKCHKDMMLKQEQAKLAASSIGSIVNGSSSSIEDDPVATANVYIPVSPVESKVVSSQTLLASTSEESAVEKPKEGPRRCTSCNKRVGLTGFNCRCGNIFCAVHRYSEKHDCPFDYRTAGRDAIAKANPVVKAEKLDKI* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01123 199 ProSiteProfiles Zinc finger A20-type profile. 39 73 IPR002653 GO:0003677|GO:0008270
Pte6g01123 199 ProSiteProfiles Zinc finger AN1-type profile. 134 180 IPR000058 GO:0008270
Pte6g01123 199 SMART AN1_Zf_4 140 177 IPR000058 GO:0008270
Pte6g01123 199 SUPERFAMILY AN1-like Zinc finger 121 194 IPR035896 -
Pte6g01123 199 Gene3D - 27 92 - -
Pte6g01123 199 SMART A20_3 42 66 IPR002653 GO:0003677|GO:0008270
Pte6g01123 199 FunFam Zinc finger AN1-type containing 6 113 195 - -
Pte6g01123 199 Pfam AN1-like Zinc finger 140 176 IPR000058 GO:0008270
Pte6g01123 199 Gene3D - 114 195 IPR035896 -
Pte6g01123 199 Pfam A20-like zinc finger 43 66 IPR002653 GO:0003677|GO:0008270
Pte6g01123 199 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 44 80 - -
Pte6g01123 199 PANTHER AN1-TYPE ZINC FINGER PROTEIN 40 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01123 Pte-Chr6 29318147 29323198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01123 35 200 C2H2 Transcription Factor Family AT3G52800 45.783 1.54e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01123 - - qsa:O6P43_000126 284.648