Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01102 ATGGACCAAATAACTGAGATTATCTATAAAGGCCAGCACAATCATGATGTTCCTCAACCGAATAAGCGTGGAAGAGATGGTAGTAATTTTAATGCAAATGCAGATGTTGGAGCGGGAAATGAACTTGGTCCACAAAATGGGGGAGGAAATTCGAATGCCTTGGGAGAAATGGTGCTTTCTCAATCAGTGTCATCGGGTGTAGGTTCTTATCAGATGTCTGTGCTGCCTGGATCAAGTGATAGTAAAGAAGCAAGTGGTGTAAAAGAAAAGGGGGACTATCATGCTGAACCACCTTCAAAGAAGAGAAATACTGAATCTGGAGATTGTGATTTACCCCTTTCACACAAGACCATAACTGAACCAAAAATTGTGGTGCAAACGAGAAGTGAAGTAGATCTTTTAGATGATGGCTACAGATGGCGCAAGTATGGACAAAAAGTGGTCAAGGGAAATCCCCATCCAAGGAGCTACTACAAATGCACTAGTATAGGATGCAATGTCCGGAAGCATGTGGAAAGAGCTTCAACAGACCCCAAAGCAGTTATAACTACGTACGAGGGTAAACATAACCATGACATTCCTTTGAGAAGAAATAGCAGTCATAGCACAGTGAATGCTAATGCAATGCCATCCAAACCAGGCCGGGTATTCCCTGAGAAACATTATTTGCTTGAAGATGTTGATTCTGAAAAGATTGACCAAAGACCTGTAGCTTTGCTTTTGAAAGAAGAACAAATTACAGTGAGATGA 750 0.4147 MDQITEIIYKGQHNHDVPQPNKRGRDGSNFNANADVGAGNELGPQNGGGNSNALGEMVLSQSVSSGVGSYQMSVLPGSSDSKEASGVKEKGDYHAEPPSKKRNTESGDCDLPLSHKTITEPKIVVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSIGCNVRKHVERASTDPKAVITTYEGKHNHDIPLRRNSSHSTVNANAMPSKPGRVFPEKHYLLEDVDSEKIDQRPVALLLKEEQITVR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01102 249 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 206 IPR044810 GO:0003700
Pte6g01102 249 MobiDBLite consensus disorder prediction 83 109 - -
Pte6g01102 249 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01102 249 SUPERFAMILY WRKY DNA-binding domain 126 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g01102 249 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01102 249 MobiDBLite consensus disorder prediction 1 114 - -
Pte6g01102 249 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g01102 249 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01102 249 MobiDBLite consensus disorder prediction 44 80 - -
Pte6g01102 249 FunFam WRKY transcription factor 33 121 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01102 Pte-Chr6 29018639 29020314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01102 3 247 WRKY Transcription Factor Family AT2G03340 49.421 1.72e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte6g01102 WRKY 8.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01102 - - qsa:O6P43_009115 311.227