Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01101 ATGTACCTCATTCTTCGATGGTTTCAGGTTGGGCAAGGTACATACAGCAGTGTATTCCGAGCACGTGAAGTTGAGACAGGGAGAATGGTTGCCTTGAAGAAGGTCCGGTTTGATACATTTCAACCGGAAAGCATCAGGTTCATGGCAAGGGAAATAACCATTCTGCGCAGACTCGATCACCCTAATGTTATGAAATTGGAGGGTCTCATCACGTCCCGGTTATCAAACAGCATATACTTTGTATTTGACTACATGGAACACGACCTTGCCGGCCTAGTATCCAATCCTGAGATCACGTTCACTGAATCCCAGGTTTGTGGTCAATCCTCCATTAGAGAAACAATGCCACATTTCATGTAG 360 0.4528 MYLILRWFQVGQGTYSSVFRAREVETGRMVALKKVRFDTFQPESIRFMAREITILRRLDHPNVMKLEGLITSRLSNSIYFVFDYMEHDLAGLVSNPEITFTESQVCGQSSIRETMPHFM* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01101 119 FunFam probable serine/threonine-protein kinase At1g54610 4 86 - -
Pte6g01101 119 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pte6g01101 119 Pfam Protein kinase domain 9 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01101 119 Gene3D Phosphorylase Kinase; domain 1 2 99 - -
Pte6g01101 119 ProSiteProfiles Protein kinase domain profile. 4 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01101 119 PANTHER CELL DIVISION PROTEIN KINASE 9 105 - -
Pte6g01101 119 SUPERFAMILY Protein kinase-like (PK-like) 9 105 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01101 Pte-Chr6 29012100 29012459 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01101 9 105 Core Cell Cycle Gene Families AT5G10270 41.071 2.31e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte6g01101 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01101 - - gmx:100790917 172.94