Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01100 ATGAGGCAGCTACTGAGTGGGATTGAACACTGCCACCTGAGAGGTATAATGCACCGAGACATCAAGACCTCAAATATATTGGTAAACAACGATGGTGTTCTGAAAATAGGAGATTTTGGCTTGGCAAATACCCTGAGCACAAATAACAAGCAACCACTAACCAGTCGTGTTGTGACTTTATGGTATCGTCCACCTGAGTTATTGATGGGTGCAACCAATTACAATGTATCGGTGGATCTCTGGAGTGTGGGTTGTGTATTTGCCGAACTGTACCTGGGAAAGCCAATTCTTAAAGGGAGAACAGAGGTGATAATCTTCTTTGTTGTTTCATTTACAACTTGGGAGGCAGAATTAAAAGTCCTTAATTCGTAA 372 0.4194 MRQLLSGIEHCHLRGIMHRDIKTSNILVNNDGVLKIGDFGLANTLSTNNKQPLTSRVVTLWYRPPELLMGATNYNVSVDLWSVGCVFAELYLGKPILKGRTEVIIFFVVSFTTWEAELKVLNS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01100 123 SUPERFAMILY Protein kinase-like (PK-like) 1 109 IPR011009 -
Pte6g01100 123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Pte6g01100 123 PANTHER CELL DIVISION PROTEIN KINASE 1 103 - -
Pte6g01100 123 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Pte6g01100 123 Pfam Protein kinase domain 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01100 123 SMART serkin_6 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01100 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01100 Pte-Chr6 29011639 29012010 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01100 1 102 Core Cell Cycle Gene Families AT5G64960 59.804 6.85e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte6g01100 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01100 - - vum:124825561 198.749