Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01097 ATGGAGTCAGCAGAGGCCTCTCTTGCTAATATAAGTTTCCAATCTCCTCCTTTAATTGTTGATAAGCCAACGAATGATGGCTATAATTGGCGCAAGTATGGACAAAAGCAAGTAAAGGGAAGTGAGTGTCCACGAAGTTATTACAAGTGCAGTCACTTAAACTGCCCTGTGAAGAAGAAGGTCGAGCGATCCCCTGATGGACAAATAACTGAGATTATCTATAAAGGCCAGCACAATCATGATGTTCCTCAACCGAATAAGCGTGGAAGAGATGGTAGTAATTTTAATGCAAATGCAGATGTTGGAGCGGGAAATGAACTTGGTCCACAAAATGGGGGAGGAAATTCGAATGCCTTGGGAGAAATGGTGCTTTCTCAATCAGTGCCATCGGGTGTAGGTTCTTATCAGATGTCTGTGCTGCCTGGATCAAGTGATAGTAAAGAAGCAAGTGGTGTAAAAGAAAAGGGGGACTATCATGCTGAACCACCTTCAAAGAAGAGGCAAGTTCAACTTTTGTTGGTTATATATAGTTGTGAAAGTTTTGTTAATCTTTGA 555 0.4162 MESAEASLANISFQSPPLIVDKPTNDGYNWRKYGQKQVKGSECPRSYYKCSHLNCPVKKKVERSPDGQITEIIYKGQHNHDVPQPNKRGRDGSNFNANADVGAGNELGPQNGGGNSNALGEMVLSQSVPSGVGSYQMSVLPGSSDSKEASGVKEKGDYHAEPPSKKRQVQLLLVIYSCESFVNL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01097 184 MobiDBLite consensus disorder prediction 1 26 - -
Pte6g01097 184 Gene3D WRKY domain 16 84 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g01097 184 FunFam WRKY transcription factor 13 84 - -
Pte6g01097 184 MobiDBLite consensus disorder prediction 109 145 - -
Pte6g01097 184 ProSiteProfiles WRKY domain profile. 25 83 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01097 184 MobiDBLite consensus disorder prediction 148 164 - -
Pte6g01097 184 Pfam WRKY DNA -binding domain 25 81 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01097 184 MobiDBLite consensus disorder prediction 74 164 - -
Pte6g01097 184 SMART WRKY_cls 24 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01097 184 MobiDBLite consensus disorder prediction 1 19 - -
Pte6g01097 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 166 IPR044810 GO:0003700
Pte6g01097 184 SUPERFAMILY WRKY DNA-binding domain 22 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01097 Pte-Chr6 28998399 28998953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01097 25 83 WRKY Transcription Factor Family AT1G13960 56.667 1.25e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte6g01097 WRKY 5.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01097 - - jre:108985955 202.601