Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01066 ATGGCCTTCCCACCACCTAGTTTCATGTTTCAAAGTCTACATGAAGATCAAGACCAGCTTAACCCCACTTCCCTCAACAACTTTCCATCATGTCCAACCCAACACTTTCACGGTGGTGCACCATTCATGATGAAGCGATCAATGTCATTTTCAGGCATCGAGAACAAGTGCGATGAGGGGCATGTTGACGATGAATTGTCAGACGATGGATCACAGCTAGGGGAGAAGAAGAAAAGGCTGCATTTAGAACAGGTGAAAGCACTTGAAAAGAGCTTTGAATTGGGGAACAAGCTTGAGCCAGAAAGGAAAATGCAACTAGCTAAGGCACTTGGTCTGCAGCCTAGGCAGATTGCCATTTGGTTTCAGAACCGAAGGGCTAGATGGAAAACCAAGCAGTTGGAAAAAGACTATGAAGTACTCAAGAAGCAATTCGAAGCACTAAAATCAGATAATGATGCCCTTCACGCTCAGAACAATAAACTTCACGAAGAGTTAGTGGCACTGAAAGGCAGAGGTAACGGCGAAGCGGCAACGATATGTCATAAGAAAGAGAACGAGGGTTCGTGGAGCAATGGAAGTGACAGCAGCTCTGACGTCAATCTAGAAATATCGAGGAATCCAGTTATAAATAGTTCCTTATCTTCTCAAAATGCAAAAAAATTTCTATCCTCAGCCACTAGGCCACAAAGCATAACCCAATTCCTCCAAGCCTCATCAAGATCGGACCTCCATGGCTTGAAACTCGATCAAATGGTTCAAGAGGAAAACTTTTGCAACATGTTTAATGGAATTGATGAGCAGCAGCACAACTTTTGGCCTTGGCCACCTGAGCAGCAACATTTCCATTGA 849 0.4417 MAFPPPSFMFQSLHEDQDQLNPTSLNNFPSCPTQHFHGGAPFMMKRSMSFSGIENKCDEGHVDDELSDDGSQLGEKKKRLHLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFEALKSDNDALHAQNNKLHEELVALKGRGNGEAATICHKKENEGSWSNGSDSSSDVNLEISRNPVINSSLSSQNAKKFLSSATRPQSITQFLQASSRSDLHGLKLDQMVQEENFCNMFNGIDEQQHNFWPWPPEQQHFH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01066 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 44 274 IPR045224 GO:0003700
Pte6g01066 282 FunFam Homeobox-leucine zipper protein ATHB-13 68 135 - -
Pte6g01066 282 CDD homeodomain 76 132 IPR001356 GO:0003677
Pte6g01066 282 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
Pte6g01066 282 PRINTS Lambda-repressor HTH signature 111 127 IPR000047 GO:0003677
Pte6g01066 282 PRINTS Lambda-repressor HTH signature 102 111 IPR000047 GO:0003677
Pte6g01066 282 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
Pte6g01066 282 Gene3D - 68 149 - -
Pte6g01066 282 SMART HOX_1 74 135 IPR001356 GO:0003677
Pte6g01066 282 Pfam Homeobox associated leucine zipper 131 170 IPR003106 GO:0006355|GO:0043565
Pte6g01066 282 Coils Coil 123 171 - -
Pte6g01066 282 Pfam Homeodomain 77 129 IPR001356 GO:0003677
Pte6g01066 282 SUPERFAMILY Homeodomain-like 68 133 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01066 Pte-Chr6 28744100 28746202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01066 1 274 Homeobox Transcription Factor Family AT3G01220 53.169 1.16e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte6g01066 Homeodomain 3.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01066 K09338 - qsa:O6P43_009065 395.586