Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01063 ATGGCTGAAGCTACAGAGCAGCCTAAAACATTGCCTGAAGCTGAGAAGAAAACGGAGCAGAGCGTACCCTTTCACAAGCTCTTTTCTTTTGCAGACAAGTATGATTGGATGCTCATGATATCTGGAAGCTTAGGAGCTATTGTACATGGCTCGTCAATGCCTGTCTTCTTTCTTCTCTTTGGTGAAATGGTAAACGGGTTTGGCAAAAACCAGTCTGATATGAAAAAAATGACTGAAGAAGTATCCAAGTATGCTCTCTATTTTATCTACCTTGGTTTGTTTGTTTGCATATCATCCTATGCAGAGATTTCATGCTGGATGTACTCTGGAGAGAGACAGACAAGCACATTGAGAAAAATGTACTTGGAAGCAGTTCTGAAACAAGACGTTGGTTTCTTTGACACTGATGCCAGAACAGGGGATATTGTATTCAGTGTGTCCACAGACACATTGCTTGTCCAAGATGCTATTAGTGAGAAGGTGGGCAACTTCATACATTACCTTTCAACATTTCTGGCTGGATTGGTGGTTGGATTTGTGTCAGCATGGAGGCTCGCTCTTCTTAGTGTAGCAGTGATTCCAGGCATTGCATTTGCAGGTGGTTTGTATGCTCACACTCTCACTGGTCTCACTTCCAAGAGTCGTGAATCTTATGCTAACGCCGGTGTCATTGCTGAGCAGGCGATTGCTCAAGTACGGACTGTCTATTCATATGTCGGTGAGAGCAAGGCTCTGAATTCTTATTCTGATGCTATACAAGACACACTTAAGATTGGATATAAGGCAGGAATGGCCAAAGGTCTCACCCTAGGATGTACCTATGGAATAGCCTGCATGTCATGGGCACTTGTTTTCTGGTACGCCGGTGTTTTCATCAGAAATGGAAAGACTGATGGAGGCAAGGCATTTACGGCTATCTTCTCTGCCATTGTTGGTGGCATGAGTTTGGGGCAGTCATTTTCAAATCTTGGTGCCTTCAGTAAAGGCAAAACAGCTGGCTTTAAATTGATGGAAATCATCAAACAGAAGCCCTCCACAGTAGAAGATATTTCAGATGGGAAGTGCTTAGCTGTGGTTAACGGCAATATTGAGTTTAAGGACGTCAGTTTCAGCTATCCCTCGAGGCCAGATGTAATGGTATTTCACAACTTCTCAATTCTATTCCCTTCTGGAAAAACTGTCGCTGTTGTTGGTGGAAGTGGTTCAGGGAAAAGCACTGTTGTTGCCTTGATAGAAAGATTCTATGATCCAAGTGAAGGGCAAGTTTTACTTGACAATGTGGATATAAAGACCCTTCAACTAAATTGGTTACGTGATCAGATAGGGCTGGTCAATCAGGAACCTGCTCTCTTTGCAACTACCATCCTTGAGAACATACTTTACGGAAAACCTGATGCAACAATGGCTGAGGTGGATGCTGCCACTTCTGCTTCAAATGCCCAAAGTTTCATTACCTTGCTACCCAATGGATATAACACTCAGGTTGGGGAGCGCGGAGTCCAGCTGTCTGGTGGTCAGAAACAGAGAATTGCTATTGCTAGAGCTATGTTGAAAAATCCTAAGATCCTCCTTCTCGATGAAGCCACTAGCGCACTTGATGCTGCCTCTGAGAGCATCGTTCAGGAGGCACTAGATCGTCTAATGGTTGGGCGTACAACCGTAGTGATCGCCCATCGCCTGTCCACCATAAGAAACGTTGATTCAATTGCAGTGATACAGCAAGGACAAGTTGTTGAGATGGGAACACATGAAGAACTGATTGTCAAAGGAGGCACTTACGCCACGCTAATCAGATTTCAAGAAATGGTAGGGAATAGGGACTTCTCCAATTCATCAACTCGGCGATCACGTTCCTCGCGCTTGAGCCATTCGTTGTCCACAAAATCTTTAAGTCTTCGGTCGGCCAGCTTGAGAAACTTGAGCTATCAGTATAGTACTGGAGCTGATGGCCGCATAGAAATGATCTCAAATGCAGAAACTGACAAGAAAAATCCTGCTCCTAGGGGATATTTCTGCAGGCTACTCAAGTTAAATGCTCCTGAATGGCCTTACTCAATAACTGGAGCTATAGGGTCTATACTTTCTGGTTTCATTGGTCCAACTTTTGCCATTGTGATGAGCAATATGATTGAGGTATTCTACTACAGAAATTATGCTTCCATGGAAAGGAAGACCAAGGAATTTGTCTTCATCTACATTGGAGCCGGTCTTTATGCAGTTGTCGCATATTCAATCCAGCATTACTTCTTTAGTATCATGGGAGAAAATCTTACCACTAGAGTTAGAAGAATGATGCTTGCGGCAATTTTAAGGAATGAAGTTGGATGGTTCGATGAGGACGAGCACAATTCAAACCTCCTTGCAGCCCGCCTTGCCGCTGATGCTGCCGATGTGAAGTCTGCAATTGCTGAGAGGATCTCTGTGATGCTTCAAAACATGACTTCACTGCTTACTTCATTTATAGTAGCCTTCATAGTGGAATGGAGGGTTTCACTTTTAATCTTAGCTACCTTCCCGCTTCTTGTTCTGGCAAATTTTGCTCAGCAATTATCTCTCAAAGGATTTGCTGGGGACACAGCAAAGGCTCATGCCAAGGCAAGCATGATTGCTGGGGAGGGAGTAAGTAACATCAGAACAGTTGCAGCTTTCAATGCCCAAAATAAAATTCTTTCACTGTTTTGCAATGAGCTCCGTATCCCTCAGCTTCAAAGCTTGCGTAAAAGCCAAACTTCTGGCCTCCTATTTGGTCTTTCTCAGCTTGCTCTTTATGCTTCTGAAGCTCTCATTCTTTGGTATGGTGCACATCTAGTAAGCAGAGGAGTGTCAACTTTTTCAAAGGTCATTAAAGTGTTTGTGGTTTTGGTCATCACAGCTAACTCAGTTGCTGAAACTGTTGGTCTTGCACCAGAGATTATAAGAGGTGGTGAATCAGTTGGCTCGGTCTTTTCGATACTTGATCGACCAACTAGGATTGACCCAGATGATCCTGATGATGCTGAGCCAGTTGAATCTATTCGTGGTGAAATTGAATTTAGACATGTTGATTTTGCCTATCCTTCTAGACCTGATATCGTGGTTTTCAAAGATTTTAATCTTAGAATCCGCGCAGGACAGAGCCAAGCACTCGTCGGAGCTAGTGGTTCTGGCAAGAGTTCTGTCATTGCACTCATAGAACGGTTCTATGACCCCATTGCCGGAAAAGTCATGATAGATGGAAAGGACATCAGAAAACTGAATTTGAGATCCTTAAGGCTTAAAATTGGATTGGTACAACAAGAACCAGCGCTTTTCTCAGCGAGCATTTTCAACAACATTGCCTATGGTAAGGATGGAGCAACCGAAGCCGAAGTAATCGAAGCAGCGCAAACCGCTAACGTCCATGCATTTATAAGTGGATTGCCAGATGGTTACAAGACACCAGTTGGGGAAAGAGGTGTTCAACTCTCAGGTGGCCAAAAACAAAGGATAGCAATTGCTAGAGCTGTGCTTAAAGACCCAACAATCCTTCTGCTAGATGAAGCAACAAGTGCTCTTGACGCTGAATCAGAATGTGTGCTACAGGAAGCTCTTGATAGACTTATGAGGGGCCGCACCACAGTGCTTGTTGCACACCGTTTGTCAACTATAAGGGCGGTGGACTGCATTAGTGTTGTCCAAGACGGTCAGATTGTAGAGCAAGGAAGCCATGATGAACTAGTCAGCCGCCCTGAGGGTGCATATTCTAGACTACTGCAGCTACAACATCATAATGTATAA 3756 0.4396 MAEATEQPKTLPEAEKKTEQSVPFHKLFSFADKYDWMLMISGSLGAIVHGSSMPVFFLLFGEMVNGFGKNQSDMKKMTEEVSKYALYFIYLGLFVCISSYAEISCWMYSGERQTSTLRKMYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAHTLTGLTSKSRESYANAGVIAEQAIAQVRTVYSYVGESKALNSYSDAIQDTLKIGYKAGMAKGLTLGCTYGIACMSWALVFWYAGVFIRNGKTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKTAGFKLMEIIKQKPSTVEDISDGKCLAVVNGNIEFKDVSFSYPSRPDVMVFHNFSILFPSGKTVAVVGGSGSGKSTVVALIERFYDPSEGQVLLDNVDIKTLQLNWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVDAATSASNAQSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAASESIVQEALDRLMVGRTTVVIAHRLSTIRNVDSIAVIQQGQVVEMGTHEELIVKGGTYATLIRFQEMVGNRDFSNSSTRRSRSSRLSHSLSTKSLSLRSASLRNLSYQYSTGADGRIEMISNAETDKKNPAPRGYFCRLLKLNAPEWPYSITGAIGSILSGFIGPTFAIVMSNMIEVFYYRNYASMERKTKEFVFIYIGAGLYAVVAYSIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEDEHNSNLLAARLAADAADVKSAIAERISVMLQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKASMIAGEGVSNIRTVAAFNAQNKILSLFCNELRIPQLQSLRKSQTSGLLFGLSQLALYASEALILWYGAHLVSRGVSTFSKVIKVFVVLVITANSVAETVGLAPEIIRGGESVGSVFSILDRPTRIDPDDPDDAEPVESIRGEIEFRHVDFAYPSRPDIVVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMIDGKDIRKLNLRSLRLKIGLVQQEPALFSASIFNNIAYGKDGATEAEVIEAAQTANVHAFISGLPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALDRLMRGRTTVLVAHRLSTIRAVDCISVVQDGQIVEQGSHDELVSRPEGAYSRLLQLQHHNV* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01063 1251 Gene3D ABC transporter type 1, transmembrane domain 26 974 IPR036640 GO:0005524|GO:0016020
Pte6g01063 1251 Gene3D ABC transporter type 1, transmembrane domain 975 997 IPR036640 GO:0005524|GO:0016020
Pte6g01063 1251 Pfam ABC transporter 382 530 IPR003439 GO:0005524
Pte6g01063 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1247 IPR027417 -
Pte6g01063 1251 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 991 - -
Pte6g01063 1251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1009 1245 IPR003439 GO:0005524
Pte6g01063 1251 FunFam ABC transporter B family member 1 665 974 - -
Pte6g01063 1251 Gene3D - 998 1248 IPR027417 -
Pte6g01063 1251 Gene3D - 353 601 IPR027417 -
Pte6g01063 1251 SMART AAA_5 390 576 IPR003593 GO:0016887
Pte6g01063 1251 SMART AAA_5 1036 1222 IPR003593 GO:0016887
Pte6g01063 1251 ProSitePatterns ABC transporters family signature. 1148 1162 IPR017871 GO:0005524|GO:0016887
Pte6g01063 1251 Pfam ABC transporter transmembrane region 44 313 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g01063 1251 Pfam ABC transporter transmembrane region 688 957 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g01063 1251 SUPERFAMILY ABC transporter transmembrane region 25 348 IPR036640 GO:0005524|GO:0016020
Pte6g01063 1251 PANTHER ABC TRANSPORTER B FAMILY 7 698 IPR039421 -
Pte6g01063 1251 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 42 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g01063 1251 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 336 - -
Pte6g01063 1251 FunFam ABC transporter B family member 19 353 601 - -
Pte6g01063 1251 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Pte6g01063 1251 Pfam ABC transporter 1028 1176 IPR003439 GO:0005524
Pte6g01063 1251 FunFam ABC transporter B family member 1 26 359 - -
Pte6g01063 1251 SUPERFAMILY ABC transporter transmembrane region 667 996 IPR036640 GO:0005524|GO:0016020
Pte6g01063 1251 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte6g01063 1251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 363 599 IPR003439 GO:0005524
Pte6g01063 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 600 IPR027417 -
Pte6g01063 1251 FunFam ABC transporter B family member 19 999 1248 - -
Pte6g01063 1251 CDD ABC_MTABC3_MDL1_MDL2 363 600 - -
Pte6g01063 1251 CDD ABC_MTABC3_MDL1_MDL2 1009 1247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01063 Pte-Chr6 28704570 28710619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01063 8 1247 Calmodulin-binding Proteins AT2G36910 52.711 0.0 1332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01063 K05658 - gmx:100797124 2155.56