Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01050 ATGGGAGAAGAGCAGACGAAGGGGAATACAATATCGGAAGTGGTATTGAAGAAGAGGAAATCCAATGAGGCTCGAGCGCTGATAAAGAAAGACCAATTTGAGCGCAGAACCAAGAAAAAAGACAAAAGTAAAGTTTTTATCAAAAGGCCTCAGGATTATATCATAGAACATCGCAACAAGGAATTAGATCTCATTCGGATGAGACGGAGGTCACAGAGAAAACTGCCAACTCTAAAATCGAAGTTGCTATTAGTCATCCGCATCCAGGGAAAAAATGACATGCATCAAAAGACCAGGAAGATCTTAGGGAGCTTGAGATTGAGGAGAAACTTCGATGCTGTTTTTATGAAGGCAAATGAATCTGCAGTGGCAAAGCTTCAGATCGTGGAGCCATATGTAACCTATGGGTATCCTAATATCAAGAATGTGAGGGACCTTATCTTCAAGAGGGGTTACGGAAGAGTAGATAAGCAAAAGGTTCCTTTGACAGACAATAACCTTATTGAACGGGAACTGGGGAAGTGTGGTATCATTTGTATCGAAGATATGGTGCGTGAGATCACTGATGTTGGTGCCCATTTCAAGGAGGTAACTAGCTTTTTATGCCCCTTTGCACTCAGCAAGCCTCAAAGTGGATTGCAAGGGTCAAAAACCTTGTACAGGCAAGGTGGTGATGCTGGCAATCGTGAGGACAATATCAATGATTTGATTGACAAGATGAACTAG 726 0.4215 MGEEQTKGNTISEVVLKKRKSNEARALIKKDQFERRTKKKDKSKVFIKRPQDYIIEHRNKELDLIRMRRRSQRKLPTLKSKLLLVIRIQGKNDMHQKTRKILGSLRLRRNFDAVFMKANESAVAKLQIVEPYVTYGYPNIKNVRDLIFKRGYGRVDKQKVPLTDNNLIERELGKCGIICIEDMVREITDVGAHFKEVTSFLCPFALSKPQSGLQGSKTLYRQGGDAGNREDNINDLIDKMN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01050 241 Gene3D - 82 241 IPR036919 -
Pte6g01050 241 NCBIfam 60S ribosomal protein uL30 13 241 IPR005998 GO:0000463|GO:0003735|GO:0022625
Pte6g01050 241 SUPERFAMILY Ribosomal protein L30p/L7e 82 241 IPR036919 -
Pte6g01050 241 MobiDBLite consensus disorder prediction 219 241 - -
Pte6g01050 241 Pfam Ribosomal protein L30p/L7e 83 133 IPR016082 -
Pte6g01050 241 PANTHER 60S RIBOSOMAL PROTEIN L7 9 241 IPR039699 -
Pte6g01050 241 FunFam 60S ribosomal protein L7 82 186 - -
Pte6g01050 241 CDD Ribosomal_L7_archeal_euk 82 241 IPR035808 -
Pte6g01050 241 Pfam Ribosomal L30 N-terminal domain 12 73 IPR012988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01050 Pte-Chr6 28572066 28574328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01050 1 242 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 52.823 2.40e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01050 K02937 - qsa:O6P43_017954 331.643