Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01047 ATGGGTTTTGGGTCCGATGCAATCAAAGCTGAAACTTTGGCCGTGGATAAGTCAAAGGCAAGGAAGATCAAAGATGGTGGTGCAGAACGAGAAAGTGGTTGTTGGTCGAAGCTCAACTTTATGTGTATATGTATGCCTTCAAGATCAAAGGTTGATAGCACCATCAGTGGCACTCCCACACAGCATGCACTGGAATGCAAAGTTTCGCATGTGAAAAATGGAGACGAGAAAGTAGTTCCTTCCAGTTCCTCAAAGCCTAGTAATGCAGAAAGTACGTCTTCCACTCCCAATTTCAGTGAGGAACTGAAGATTGCTTCTTGGTTGCGAAAGTTCACATTTAATGAGCTAAAGCTGGCTACTAGAAATTTCAGGCCTGAAAGTCTCCTTGGTGAGGGTGGATTTGGTTGTGTGTTCAAAGGTTGGATAGAGGAAAATGGTACTGCACCTGTGAAACCTGGAACTGGGCTTACCGTTGCAGTCAAGACCCTCAATCATGATGGACTTCAAGGCCATAAAGAGTGGCTTGCTGAAATTAACTTTCTTGGCGACCTCATTCATCCAAATCTGGTTAAGTTAGTTGGTTATTGCATTGAAGATGATCAGAGACTACTGGTTTACGAGTTTATGCCCCGAGGAAGTTTGGAGAACCACCTTTTCAGAAGACCCCTTCCTCTTCCTTGGTCCATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTCGCATTTCTTCACGAAGAAGCACGGAGGCCTATCATATATCGCGATTTTAAAACATCTAACATTCTGCTTGATGCGGAATACAATGCCAAACTCTCTGATTTTGGTCTTGCAAAAGATGGGCCTGAAGGCGAAAAGACCCATATATCAACACGAGTCATGGGAACTTATGGTTATGCAGCTCCTGAGTATGTAATGACTGGGCATTTGACATCAAAGAGTGATGTCTACAGTTTTGGAGTAGTCTTGCTGGAAATGCTCACTGGCCACAGATCCATTGACAAAAATAGACCAAATGGGGAGCACAACCTTGTGGAGTGGGCAAGGCCACTACTAAGAGATAGGAGGCTGTTTTATCGGTTGATAGATCCTCGTCTTGAAGGTCACTTCTCAATTAAAGGGGCACAGAGAGCAACTCAGCTTGCTGCTCAGTGCCTTAGCCGTGATCCAAAATGTAGACCGGTGATGGGTGAGGTTGTAGAAGCATTAAAGCCTCTGCCAAACCTTAAAGACATGGCTGTCTCATCCCTTTCATTCCAGAAAATGCCAGTAGATCGTACGAAGTCCATGCCAACTGCTAAAGCTGGCATGCGGACTCAGGTAGTTTATGTAACAAAGAAAGGTCAGCCTGTACGAAGCTTTTCAAGCTCTAATGGTTCACATCCTTCCCCATATCATCATCTTTGCCAGTCACCAAATCCTAATAGTAAAAAGCAATAA 1440 0.4424 MGFGSDAIKAETLAVDKSKARKIKDGGAERESGCWSKLNFMCICMPSRSKVDSTISGTPTQHALECKVSHVKNGDEKVVPSSSSKPSNAESTSSTPNFSEELKIASWLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEINFLGDLIHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEARRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGHRSIDKNRPNGEHNLVEWARPLLRDRRLFYRLIDPRLEGHFSIKGAQRATQLAAQCLSRDPKCRPVMGEVVEALKPLPNLKDMAVSSLSFQKMPVDRTKSMPTAKAGMRTQVVYVTKKGQPVRSFSSSNGSHPSPYHHLCQSPNPNSKKQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01047 479 PANTHER OS01G0588500 PROTEIN-RELATED 89 406 - -
Pte6g01047 479 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Pte6g01047 479 CDD STKc_IRAK 129 406 - -
Pte6g01047 479 FunFam Serine/threonine-protein kinase BIK1 90 208 - -
Pte6g01047 479 SUPERFAMILY Protein kinase-like (PK-like) 96 403 IPR011009 -
Pte6g01047 479 MobiDBLite consensus disorder prediction 450 479 - -
Pte6g01047 479 Gene3D Transferase(Phosphotransferase) domain 1 209 421 - -
Pte6g01047 479 Pfam Protein kinase domain 126 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01047 479 ProSiteProfiles Protein kinase domain profile. 123 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01047 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pte6g01047 479 FunFam Probable serine/threonine-protein kinase PBL8 209 422 - -
Pte6g01047 479 MobiDBLite consensus disorder prediction 76 96 - -
Pte6g01047 479 MobiDBLite consensus disorder prediction 75 96 - -
Pte6g01047 479 Gene3D Phosphorylase Kinase; domain 1 107 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01047 Pte-Chr6 28532163 28536460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01047 69 442 Glycoside Hydrolase AT3G07070 48.168 1.41e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte6g01047 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01047 - - gmx:100499647 724.546