Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01045 ATGCCTTTCTTCTTTGTACTTTGTGGGCTGAGATTCAATGTTAGTTCATTGAATAATAATAATGTTCATCTTACAACAGTGGGAGCAGTCATCTTGCTGGCTTTCCTGACCAAGTTTTTGGTCAGTTTGATATGTAAGATGTCACCAAAGGAAGGTGTATCTCTCGGTCTACTCATGAACACCAAAGGAATTTTGACCTTAATTGCTCTCGGCAGTGCATTGGAGATACAGATTATGACACTTCCCTCTGGCTTAAAATTGAGAATGATCATGAAGTACTCGAGGAATTTCCATCAGTTCAAGCTTAAGAACGTTGAGAGCTCCAACCCCCAAAACCCTTTAAGAATAATGGCCAACATTTTTGTAAGGTGTGATGGGAATAAACTTGCTAAGCGCTTGGAGGCCTTCAATGCAACAAAAGACTGCCCCATGATGATATTTGCTGCTCTCAGTGAGCTTTCCAAATGA 468 0.406 MPFFFVLCGLRFNVSSLNNNNVHLTTVGAVILLAFLTKFLVSLICKMSPKEGVSLGLLMNTKGILTLIALGSALEIQIMTLPSGLKLRMIMKYSRNFHQFKLKNVESSNPQNPLRIMANIFVRCDGNKLAKRLEAFNATKDCPMMIFAALSELSK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01045 155 Pfam Sodium/hydrogen exchanger family 2 75 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte6g01045 155 Gene3D - 1 89 IPR038770 -
Pte6g01045 155 PANTHER CATION/H + ANTIPORTER 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01045 Pte-Chr6 28527409 28528073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01045 1 148 Antiporter Super Family AT1G05580 23.494 1.08e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01045 K26731 - qsa:O6P43_001279 91.6633