Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01039 ATGGAGAGGAATGATGTTGATAAGGTTGATGATGTAATGTTGCCTGGGTTCCGGTTTCATCCTACAGATGAGGAGCTTGTTGGGTTTTACCTCATTAGAAAAATTCAGCACCAGTCCCTTCCTATCGAGCTAATTAAGCCGCTGGATATCTACAAATACGATCCTTGGGATTTTCCAAAGTTGGCAAGTAGTGGTGAGAAGGAGTGGTATTTTTACTGCCCAAGGGATCGGAAATACAGAAATAGCGCAAGGCCAAACAGAGTAACAGCAGCTGGATTTTGGAAGGCAACTGGGACTGACAGGCCTATATACTCCTCAGATGGGAAGTGCATTGGTTTGAAGAAGTCATTGGTGTTCTACAGAGGCAGAGCTGCCAAAGGCATCAAAACTGACTGGATGATGCATGAGTTTCGGTTACCTTCTATATCAGACTCAACTACACCTTCCAAGAAGATTTTGAACAAAAGCTATGCTGCAAGTGATGCATGGGCTATTTGTAGGATATTCAAGAAAACAAGCTCTATGGCGCAGAGAGCTCTTTCTCATTCATGGATGACTGCTGTGCCAGAGGCTATTGTTTCTGGCATGATGGCTCAGGGGACTAACTGTCAACAGTTCAGTTCAGAGAATATTTCTTGTACTACTGAAATTGGATCTGTTATACATTTCTGTGATAACACTGACTTGCAGCAAACCTCTAGTACAAGTTTTTCTGATTCAGACATTCCTCCATACAAACCTATGATGAATCCTTCTCACTTTCCTGTTTCAACTGGAGGCTTCTGCAACAGCATGGTATTCTCAGGACCAAACAAATCGCCAGTTGATGGAAATTCGATGCTTTTCAACCCCACCTTGATGGACTTTGATGGGTCAACTCAGCAGTTTGGCAGCTTTCCCGTGAGTTTACAGCAGGATATGCCAAGTAATATGAACACAGAAGGAGGGGAAGATGGCTCAAGGAAATGCACAGGTCAAGAGCAGGCGAGTAACCAATGGGGAACGGTGAGACCGATTGAATTTCCTTTCAGTTTGTCCACAGATGATGCTTGGAAACCTATGGCATGGTTTTCACCCAATTGTCCAGATGAGATGTCCTCTGGCTACTCTACAAACAAGTCTTACACTTAA 1131 0.4368 MERNDVDKVDDVMLPGFRFHPTDEELVGFYLIRKIQHQSLPIELIKPLDIYKYDPWDFPKLASSGEKEWYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPIYSSDGKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSISDSTTPSKKILNKSYAASDAWAICRIFKKTSSMAQRALSHSWMTAVPEAIVSGMMAQGTNCQQFSSENISCTTEIGSVIHFCDNTDLQQTSSTSFSDSDIPPYKPMMNPSHFPVSTGGFCNSMVFSGPNKSPVDGNSMLFNPTLMDFDGSTQQFGSFPVSLQQDMPSNMNTEGGEDGSRKCTGQEQASNQWGTVRPIEFPFSLSTDDAWKPMAWFSPNCPDEMSSGYSTNKSYT* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01039 376 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Pte6g01039 376 SUPERFAMILY NAC domain 12 171 IPR036093 GO:0003677|GO:0006355
Pte6g01039 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 235 - -
Pte6g01039 376 Gene3D NAC domain 22 176 IPR036093 GO:0003677|GO:0006355
Pte6g01039 376 FunFam NAC domain-containing protein 35 22 174 - -
Pte6g01039 376 MobiDBLite consensus disorder prediction 310 331 - -
Pte6g01039 376 ProSiteProfiles NAC domain profile. 13 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01039 Pte-Chr6 28433881 28436230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01039 4 211 NAC Transcription Factor Family AT1G26870 68.396 1.80e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte6g01039 NAM 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01039 - - jre:109013175 503.056