Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01033 ATGGCTCAGAAAACAGAGAAAGAAGAAACAGAGTTCAAAGTCCCTGAAACTATTACTCTCTGTGTGAACAACTGCGGTGTCATCGGCAACCCTGCCACAAATAACATGTGTCAGAAATGTTTCACAGCTTCCACGACGCCGACAACACCAGCAGCATCTTCTTCCACGATATCGTCTTCTTCCAACTTGGTATCGGGGATTGCAGCACCGGTTCAGTTTTCTGCTGAGAGAAGTACTAGATCCAGGCGATTACGTTCACCGGATAGGCTTAAGGAGTCCTCTTCCTTGTCCAGGCAAAGCGCAACTGCCGATCGGTCCAAATCGGAGGATCTAACTCAAACCGAGACCAAGAGAAGCGTGAATCGATGCTCTGGTTGCCGGAGAAAGGTGGGGTTGACCGGTTTCAGATGTCGGTGTGGTGAGTTGTTCTGTTCAGAGCACAGGTATTCCGATCGGCATGACTGTAGCTATGATTACAAAGCTGCAGGACGGGAAGCCATAGCGAGAGAAAACCCTGTCGTCAAAGCAGCTAAGATCGTCAGAGTTTGA 549 0.4918 MAQKTEKEETEFKVPETITLCVNNCGVIGNPATNNMCQKCFTASTTPTTPAASSSTISSSSNLVSGIAAPVQFSAERSTRSRRLRSPDRLKESSSLSRQSATADRSKSEDLTQTETKRSVNRCSGCRRKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVRV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01033 182 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 69 - -
Pte6g01033 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 57 - -
Pte6g01033 182 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Pte6g01033 182 FunFam Zinc finger AN1-type containing 6 95 178 - -
Pte6g01033 182 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 181 - -
Pte6g01033 182 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Pte6g01033 182 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Pte6g01033 182 Pfam AN1-like Zinc finger 123 160 IPR000058 GO:0008270
Pte6g01033 182 SUPERFAMILY AN1-like Zinc finger 105 176 IPR035896 -
Pte6g01033 182 MobiDBLite consensus disorder prediction 75 114 - -
Pte6g01033 182 MobiDBLite consensus disorder prediction 78 92 - -
Pte6g01033 182 Gene3D - 1 65 - -
Pte6g01033 182 SMART AN1_Zf_4 123 160 IPR000058 GO:0008270
Pte6g01033 182 Gene3D - 93 178 IPR035896 -
Pte6g01033 182 ProSiteProfiles Zinc finger AN1-type profile. 117 163 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01033 Pte-Chr6 28267950 28268864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01033 8 183 C2H2 Transcription Factor Family AT3G52800 37.500 3.80e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01033 - - qsa:O6P43_029517 248.44