Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01028 ATGCACAGATTGGGGCAACTCAGACAACCCAATTTGGCACCACTGTTAGGGTTCTGTGTCGTGGAAGAGGAAGAGTTTCTGGTTTATAAACATATGTCAAATGGGACTCTGCATTCTTTGTTGCACAGCCATGGTGCTATGTTGGATTGGTCTACTAGATTTAGAATTGGACTGGGTGCTGCTAGGGGTCTCGCTTGGTTACACCATGGATGTCATCCTCCAATTATTCACCAAAACATATGTTCAAATGTCATCCTTTTGGACGAAGACTTTGATGCGAGGCTGATGGATTTTGGCCTGGCTAGGCTGATAACTTCTGATTCTAATGGGAGTAGCCATGTTAGTGGGGATTTGGGAGATCTTGGATACATAGCACCTGAATATCCAAGCACCATGATACCTTCCCTTAAAGGGGATGTTTATGGGTTTGGGATAGTTCTGTTGGAGTTGATCACTGGGCAGAAACCTCTTGGCGTCAGCAAAGCTGATGAAGGATTTAAGGGTAATCTGGCAGATTGGGTAAATATGCTCTCAGCTTCTGGTAGAATCAAGGATTCATTTGACAGTACCATAAGTGGCAAAGGATATGATGAGGAGGTTGTAGAATTTCTGAAAATTGCATTCAATTGTTTGTCTTCTAGACCCAAAGATAGGTGGTCTATGTACCAGGTTTATCAATCGTTGAAGAATATGTGCAAAGACCAAAGTCTTTATTGA 717 0.4254 MHRLGQLRQPNLAPLLGFCVVEEEEFLVYKHMSNGTLHSLLHSHGAMLDWSTRFRIGLGAARGLAWLHHGCHPPIIHQNICSNVILLDEDFDARLMDFGLARLITSDSNGSSHVSGDLGDLGYIAPEYPSTMIPSLKGDVYGFGIVLLELITGQKPLGVSKADEGFKGNLADWVNMLSASGRIKDSFDSTISGKGYDEEVVEFLKIAFNCLSSRPKDRWSMYQVYQSLKNMCKDQSLY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01028 238 Gene3D Transferase(Phosphotransferase) domain 1 32 237 - -
Pte6g01028 238 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01028 238 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 231 - -
Pte6g01028 238 SUPERFAMILY Protein kinase-like (PK-like) 4 228 IPR011009 -
Pte6g01028 238 Gene3D Phosphorylase Kinase; domain 1 1 31 - -
Pte6g01028 238 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 32 237 - -
Pte6g01028 238 Pfam Protein tyrosine and serine/threonine kinase 4 227 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01028 Pte-Chr6 28217352 28218068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01028 1 235 Receptor kinase-like Gene Family AT3G28450 68.644 8.71e-116 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pte6g01028 PK_Tyr_Ser-Thr 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01028 - - qsa:O6P43_009034 390.193