Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01015 ATGGAAGATGGTGAAGAGGGTGGTAATAAGATCTATGGAGTTGGATACGGAAAGGTTATCGAGCACAAAGTTCCTTTCTACCGAAAAGGTCCACCATTAACAGCCATAAATAGGTTCTTATGGGGTCAGCGAAGCCATTTTCCTCAGGAACCGATTCTCAACAATGCAAAGAACAGAGAAGCAAGCTTGTCCGGAAATGGTTTGTTAAGTTTTGCCCTACCAGGTGGTGCAACCTATGAATTTTGGGGGCCACACCTCAAAGACACAAGCTCAGATGGTAGCCATTTTATGGAAGGAGAGGCTTTGAATTGGATACAAGAGAAAAACCCTAGTTCATTTCTGAGTGCAGATGGAAACGTTTTAGACAACAATTGTGAAGGTGTCGCAAAAAGGATTAAGAAATGCTCTCCTCCTTTGATCAAAGGACAGTGGAGTGATGAAGAAGACAGGAAGCTGATTAAGTTGGTTAAGCAATATGGCGTAAGAAAATGGGCACAGATTGCAGAGAACCTGGATGGAAGAGCTGGCAAGCAGTGTAGGGAGAGATGGCATAACCATCTTCGACCTGATATTAAAAAAGACAGTTGGAGTAAAGAAGAAGAGATGATTCTAGTGGAAACTCATGCCAAGGTTGGCAATCGTTGGGCTGAAATTGCAAAGTGCATCCCAGGAAGAACTGAAAATACAATAAAGAACCATTGGAATGCCACAAAAAGAAGGCAGAATTCAAAAAGAAAGAACAAGAAGACAGAAACTTCTTCATCTCAAACTTCTGTTCTTCAAGACTATATAAGAAGCCAGATGCTCGGTAACACATACAGCCTTTCTGTCATCGGTAATACTTGTCTTAGCTCCACTTCCAACACTACTCCCACCCCATCTTGCTCTACACTCTCAGAAGATCCACCAAACCAAATCAATTTCTGGCTGAATGAACCATCGGAATCTGTCGCCGGTGAGGAGTCTTCATTACTAGGTCAATCGTATGATGATGAACTCCAATTCATGAAACATCTGTTTGCACAAAATGTGAACTGGACACCTCTCTTCAACACTGCGACTGAAGCATATTCTGGGGAACAGACCAACAAATCCACCATATCCTATTCCCTTGGACCACAGCCGAACAAAGGGAATCCGCAGTTTACTGATCATCATGATACCAGTCAATATTACATCACCAACTTCATTCCACATTATGCAGACAAAAACAAGTACATAGACAATAAATTCCATGCGAAAGAGTTTGCCAGCCCCACAACTACACACCTTCATTCTGATCTCTACCTCTCGTACCTACTCAATGGAGCTGCCAATCCGTCATTGCCAACTTACTACCGTGATGACAGCATGAAAGTGGACGTGAATGTTGGTGATCAAGGTTATTTTTGTAATGGGAGGAAAGAGATGGATTTGATTGAGCTGGTTTCTTCTTCTCAATTCTCTACAAGCAGCAGCAACTAG 1464 0.4242 MEDGEEGGNKIYGVGYGKVIEHKVPFYRKGPPLTAINRFLWGQRSHFPQEPILNNAKNREASLSGNGLLSFALPGGATYEFWGPHLKDTSSDGSHFMEGEALNWIQEKNPSSFLSADGNVLDNNCEGVAKRIKKCSPPLIKGQWSDEEDRKLIKLVKQYGVRKWAQIAENLDGRAGKQCRERWHNHLRPDIKKDSWSKEEEMILVETHAKVGNRWAEIAKCIPGRTENTIKNHWNATKRRQNSKRKNKKTETSSSQTSVLQDYIRSQMLGNTYSLSVIGNTCLSSTSNTTPTPSCSTLSEDPPNQINFWLNEPSESVAGEESSLLGQSYDDELQFMKHLFAQNVNWTPLFNTATEAYSGEQTNKSTISYSLGPQPNKGNPQFTDHHDTSQYYITNFIPHYADKNKYIDNKFHAKEFASPTTTHLHSDLYLSYLLNGAANPSLPTYYRDDSMKVDVNVGDQGYFCNGRKEMDLIELVSSSQFSTSSSN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01015 487 Gene3D - 140 192 - -
Pte6g01015 487 ProSiteProfiles Myb-like domain profile. 188 238 IPR001005 -
Pte6g01015 487 Gene3D - 194 263 - -
Pte6g01015 487 CDD SANT 195 238 IPR001005 -
Pte6g01015 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 191 IPR017930 -
Pte6g01015 487 FunFam Transcriptional activator Myb isoform A 140 193 - -
Pte6g01015 487 PANTHER MYB PROTEIN-RELATED 126 256 - -
Pte6g01015 487 MobiDBLite consensus disorder prediction 365 384 - -
Pte6g01015 487 SMART sant 192 240 IPR001005 -
Pte6g01015 487 SMART sant 140 189 IPR001005 -
Pte6g01015 487 SUPERFAMILY Homeodomain-like 138 234 IPR009057 -
Pte6g01015 487 Pfam Myb-like DNA-binding domain 144 202 - -
Pte6g01015 487 CDD SANT 144 187 IPR001005 -
Pte6g01015 487 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 242 IPR017930 -
Pte6g01015 487 ProSiteProfiles Myb-like domain profile. 136 187 IPR001005 -
Pte6g01015 487 MobiDBLite consensus disorder prediction 236 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01015 Pte-Chr6 28032926 28035300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01015 20 479 MYB Transcription Factor Family AT5G58850 36.735 3.53e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte6g01015 Myb_DNA-bind_6 3.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01015 K09422 - qsu:111985900 401.749