Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01014 ATGGAAACTGGCCGTTTTTTGTTCGACCCTTCCACTTGCCGAGGAAACATGCTCATCCTCGGTAACGGTGAGCCTGCTTTTCGAGGAGGGTCGATGATGAGTCTGGAGGATGGCACTAGGAGGCGACCATTTCTGAGGTTATCGGAGGAACTGTTCGATGAGGATTACTATGACGAGCAGTTGCCGGAGAAGAAGCGCCGTCTGACCCCAGAGCAGGTACATCTGCTGGAAAGAAGCTTTGAGGCAGACAACAAACTGGAGCCAGAGCGCAAAACCCAGCTGGCAAGCAAACTAGGACTGCAACCAAGGCAGGTGGCTGTGTGGTTTCAGAATCGCAGGGCTCGGTGGAAGACAAAGCAACTTGAAAGGGATTATGATCTTCTCAAATCTTCCTATGATGCCCTGCGTGCCAATTATGACTCTGTTGTCAAGGAAAACGAGAAGCTTAGATCTGAGGTGGTGTCTTTAAGTGAGAAACTTGAAGGTAAAGAGGTGCCCCTTGTCCCAACGTCAGCTGAAAAATCTGAATCACTTGTTGGTTGGGAGATGGCCCAAGTATCACCCCTCCTGTTCAGCATTAAAGCGGAGGACCGAGTGAGTTCTGGTAGTGGTGGGAGTGCAGTGGTGGATGAGGAAGGTCCACAGCTAGTGGACAGTGAGGATTCATACTTTCCTAGTGACAACTGTGCTGCTGGAAGCGAAGCTCCAGATGACAGGATTCTATCAGAAGAAGATGATGGAAGTGATGACGGGAGGAGTTACTTCTCGGATGTGTTTGTTGATCAAGAAGATCAGAACCAGGAAGGAGATATGCTAGGTTGGTGGGTGTGGTCCTAA 837 0.4982 METGRFLFDPSTCRGNMLILGNGEPAFRGGSMMSLEDGTRRRPFLRLSEELFDEDYYDEQLPEKKRRLTPEQVHLLERSFEADNKLEPERKTQLASKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDALRANYDSVVKENEKLRSEVVSLSEKLEGKEVPLVPTSAEKSESLVGWEMAQVSPLLFSIKAEDRVSSGSGGSAVVDEEGPQLVDSEDSYFPSDNCAAGSEAPDDRILSEEDDGSDDGRSYFSDVFVDQEDQNQEGDMLGWWVWS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01014 278 CDD homeodomain 64 120 IPR001356 GO:0003677
Pte6g01014 278 Gene3D - 58 125 - -
Pte6g01014 278 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Pte6g01014 278 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Pte6g01014 278 SUPERFAMILY Homeodomain-like 64 130 IPR009057 -
Pte6g01014 278 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Pte6g01014 278 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 55 228 IPR045224 GO:0003700
Pte6g01014 278 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Pte6g01014 278 Coils Coil 118 159 - -
Pte6g01014 278 MobiDBLite consensus disorder prediction 199 264 - -
Pte6g01014 278 Pfam Homeobox associated leucine zipper 119 160 IPR003106 GO:0006355|GO:0043565
Pte6g01014 278 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Pte6g01014 278 SMART HOX_1 62 123 IPR001356 GO:0003677
Pte6g01014 278 FunFam Homeobox-leucine zipper protein HAT5 57 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01014 Pte-Chr6 28028907 28031748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01014 1 277 Homeobox Transcription Factor Family AT3G01470 55.862 1.20e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte6g01014 Homeodomain 2.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01014 K09338 - qsa:O6P43_008987 379.407