LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte6g01013	ATGAAGGAGGAAAGGGGAAATGGGGGAGCTGGTTATTTGAGAGCGGATCAGATAGATCTAAAGAGCTTGGACGAACAACTTCAGATGCATCTGAGTAGGACATGGACTATGGAGAAGACCAAGAATCAACAAGAGGAGGACCAAGGAGGTAGGTATGTACCCATTAGAGAAGAGTGGGAGATTGCTCCTTCAAACCTTGTAATCAAGAGTGTAATTGCCCGTGGTATTTTTGGGACTGTTCACCGTGGCATTTATGATGGCCATGATGTTGCTGTCAAACTTCTTGATTGGGGGGAAGAGGGTCATAGATCAGATGCTGAAATAGCTTCTTTGAGAGCGGCTTTCAAACAAGAATTTACTGTTTGGCATAAACTTGACCATCCTAATGTGACTAAGTTCATTGGGGCAATGATTGGCGCGTCAGAGCGAAACATTCAAACTGAGAATGGCCAAATGGGCATGCCAAGTAACATGTGTTGCATTGTCGTTGAGTATTGTCCTGGGGGTTCTCTGAAAGCTTATCTCATAAAGAACCGGAGAAGAAAGCTGACCTTTAAAGTAGTAGTTCAACTTGCTTTGGATCTTGCAAGAGGGTTGAGCTATCTGCACACAAAGAAAATTGCTCACAGAGATGTTAAAACAGAAAACATGCTTCTGGATAAGACAAGAACATTGAAGATAGCTGATTTCGGAGTTGCTCGTATAGAGGCTTCCAATCCTCATGACATGACTGGAGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTGAATGGCAATCCTTACAACAGGAAGTGTGATGTTTACAGTTTTGGTATATGTTTGTGGGAGATATACTGCTGCGACATGCCATATCCTGACCTCAGCTTCTCAGAAGTGACATCTGCAGTTGTGCGTCAGAATTTGAGACCAGAGATACCACGCTGTTGTCCAGGCTCACTGGCAAATGTAATGAAACGATGTTGGGATGCCAATGCCGATAGGCGGCCGGAGATGGATGAAGTGGTAACCATGCTGTCAGCAATAGACACCTCAAAGGGTGGAGGAATGATCCCACATGATCAGGCTCAGGGCTGTTTTTGTTTCCGCAGGTATCGAGGGCCTTGA	1110	0.4505	MKEERGNGGAGYLRADQIDLKSLDEQLQMHLSRTWTMEKTKNQQEEDQGGRYVPIREEWEIAPSNLVIKSVIARGIFGTVHRGIYDGHDVAVKLLDWGEEGHRSDAEIASLRAAFKQEFTVWHKLDHPNVTKFIGAMIGASERNIQTENGQMGMPSNMCCIVVEYCPGGSLKAYLIKNRRRKLTFKVVVQLALDLARGLSYLHTKKIAHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPGSLANVMKRCWDANADRRPEMDEVVTMLSAIDTSKGGGMIPHDQAQGCFCFRRYRGP*	370

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte6g01013	369	FunFam	Kinase suppressor of Ras 1	55	150	-	-
	Pte6g01013	369	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	207	219	IPR008271	GO:0004672\|GO:0006468
	Pte6g01013	369	ProSiteProfiles	Protein kinase domain profile.	66	343	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte6g01013	369	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	51	343	-	-
	Pte6g01013	369	Gene3D	Phosphorylase Kinase; domain 1	55	166	-	-
	Pte6g01013	369	FunFam	Serine/threonine-protein kinase HT1	166	351	-	-
	Pte6g01013	369	SUPERFAMILY	Protein kinase-like (PK-like)	45	340	IPR011009	-
	Pte6g01013	369	PRINTS	Tyrosine kinase catalytic domain signature	201	219	IPR001245	GO:0004672\|GO:0006468
	Pte6g01013	369	PRINTS	Tyrosine kinase catalytic domain signature	311	333	IPR001245	GO:0004672\|GO:0006468
	Pte6g01013	369	PRINTS	Tyrosine kinase catalytic domain signature	163	176	IPR001245	GO:0004672\|GO:0006468
	Pte6g01013	369	PRINTS	Tyrosine kinase catalytic domain signature	267	289	IPR001245	GO:0004672\|GO:0006468
	Pte6g01013	369	CDD	STKc_MAP3K-like	72	340	-	-
	Pte6g01013	369	Gene3D	Transferase(Phosphotransferase) domain 1	167	356	-	-
	Pte6g01013	369	Pfam	Protein tyrosine and serine/threonine kinase	67	340	IPR001245	GO:0004672\|GO:0006468
	Pte6g01013	369	SMART	serkin_6	66	343	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte6g01013	Pte-Chr6	28014404	28017767	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte6g01013	13	370	MAP Kinase Kinase Kinase	AT3G22750	66.298	0.0	519

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Pte6g01013		PK_Tyr_Ser-Thr	2.1e-61	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte6g01013	-		-	qsa:O6P43_008986	678.707