Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01011 ATGAGCCAGGCCTTTGGATCTATACTTCCTCCAGTCTTTTATACACAGTCAGGCGGTCCATTACCTATGCCAAACTCTGTTGCAGTTGCTCATGCAGAACCCTCCTATACACAGTCTTTTATACACACTTTTGAGAATCGAGGTCGATACGTTTCTTCTGCCACTGATCAAAGTGCATCTAGTGGTTTCTGTAATGGTGCTATCAGCCATCTGAATAGCGATGCATATGGAAGCAATTGTGGAAACGATAGTACTGCTAATCAGTCCCCTGCTGTCATAAGTTATGAAAGCAAAACTGAAGACTTGACGAAATATGGATTTTCTAATAGATCTGTTCAAAGAGAAGCAGCTCTAACAAAGTTCTGCTTGAAAGGGAAAGAGAGGTGCTATGAAAAGAAGGTTCACTATGAAAGCAGAAAAAAACTTGTAGAGCAACGCCCCAGAGTTAAAGGACAATTTGTTCGTCAGGTGCAGCCTGATCTCCATCCTACTACAGAGAATAATGATAGTTCACATGATGTCTAG 525 0.4152 MSQAFGSILPPVFYTQSGGPLPMPNSVAVAHAEPSYTQSFIHTFENRGRYVSSATDQSASSGFCNGAISHLNSDAYGSNCGNDSTANQSPAVISYESKTEDLTKYGFSNRSVQREAALTKFCLKGKERCYEKKVHYESRKKLVEQRPRVKGQFVRQVQPDLHPTTENNDSSHDV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01011 174 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 35 156 IPR045281 GO:0009909
Pte6g01011 174 ProSiteProfiles CCT domain profile. 114 156 IPR010402 GO:0005515
Pte6g01011 174 MobiDBLite consensus disorder prediction 151 174 - -
Pte6g01011 174 Pfam CCT motif 114 156 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01011 Pte-Chr6 27930971 27931581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01011 49 158 Response Regulator Gene Family AT5G24470 49.091 4.66e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte6g01011 CCT 3e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01011 K12130 - gmx:100784383 164.081