Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01001 ATGGAACATTTGTCAGAAAAGAAGTTTTCTGTTGATGCAAAAGACTACAAGTTATGTGAAGAAGTTGGAGATGGTGTCAGTGCTACTGTGTATAAAGCTCTTTGCATTCCACTTAAGAAGCTAGTTGCCATCAAAGTTCTTGATTTAGAGAAGTGCAACAATGGCCTGGATAGTATTCGAAGAGAGGTACAAACAATGAGTTTGATTGATCATCCAAATGTGTTGCGGGCGCATTGCTCCTTCACTACTGGACACAAACTTTGGGTTGTAATGCCCTACATGGCTTGTGGTTCTTGTCTTCACATAATGAAATCTGCCTATCCTGAAGGGTTTGAGGAGCCAGTTATAGCTTTTCTGTTACATGAGGTTCTGAAAGCTCTTGTCTATCTTCATTCTCATGGGCACATTCATAGAGATGTGAAGGCGGGAAACATTTTGATTGACGATGATGGGGCTGTCAAATTAGCAGACTTTGGAGTATCAACTTGCATGTTTGATACTGGAGACCGGCAGCGATCAAGAAACACTTTTGTTGGAACACCTTGTTGGATGGCTCCTGAAGTTATGCAGCAACTGCATGGATATGATTTCAAAGCAGACATATGGTCACTTGGCATAACAGCACTTGAACTTGCTCATGGTCATGCACCATTTTCAAAGTATCCACCAATGAAAGTTTTGCTCATGACTTTACAAAATGCTCCTCCAGGTCTTGACTATGAAAGAGATAAGAGATTTTCGAAGTCTTTCAAGCAGATGGTAGCAACATGCTTAGTGAAGGATCCACAGAAACGCCCAACTTCAGAAAAGCTTTTAAAGCATCAGTTTTTCAAACATGCACGGTCTAGGGATTATCTAGCTCCCACCGTCCTAGTTGGTCTTGCTCCTCTGGGAGGATATAAGGTAAAGGATGCAGAGCTCTTGATGCAAAACAAATCTTTGTATGAGAACAAGGACCAATTATCACAGCGAGAATATATTCGGGGAATTAGTGCCTGGAATTTCAACCTGGAAGATTTGAGATCTCAAGCTGCCCTTATTGAAGATGAAAATATGCCAAATGCAGAAGAGGCAGCTGTCACTAAGAAGCAGCGGGACACTAACGATGATGCTGGTCTTCCAGCAGAAGGGTTATCGACATCAGAACTTAATCATTCAAAAGAAATAACCACGGAGGTGAAAGAGGATGGGTTCAGTGATTTTGATGATATGCAGAGTTCCCTTGCTTCATTTACTTCTAAACCCCTTCAAGCTCTCAAAGGTTGCTTTGATGTTGTCGAAGATGATGTCAATGAAATGAGTCCAAGAGGAATAGATCAAGAAAATGGAAAATTTAAGGATGAAAGTTCAGGGCAGCGTAGTTTCTTCCGGAACAATGTTGTTATTGAGCCTAAAAAACATTTGAGCGGTTCTCCACTTCCAGACAGTGTTTTGTCTTCTAAAACATTTACAGTTGACTCAGATAGGGATCATCTGCAGCGACGATATCATTCTGAAAGGAACCTCAGTGGTCCCATGTTGTATTGTCCACATAGAAGTACCAGCAACCTCTCATCTGTTGATGATGCAACAGATGGAGCAGTTATCAAATGTAAGGGGAGATTCAAAATGACTTCAGCAGATCTCTGTCCCAAGACTAAATGTGTGGTCACGCCAATTTGTGGAGGCTCTAGCAGTTCAACAAACTTGAACTTGACAGCTAGCTCTGTTCTTCCTTCTCTGCAATCTATTTTGCGACAAAACACTGTACAAATGGAAGAAATAGTTAAGCTGACAAAGTATGTGGAGCGAACCCCTGGAAATCATTCAGAATTAGCTGACTCAGGTCAGGTGGATCCGTCCCAGGTAAAACATCATGTTGTGATCTTCTGTAAGAATAGATGCGGGAAATAG 1893 0.4152 MEHLSEKKFSVDAKDYKLCEEVGDGVSATVYKALCIPLKKLVAIKVLDLEKCNNGLDSIRREVQTMSLIDHPNVLRAHCSFTTGHKLWVVMPYMACGSCLHIMKSAYPEGFEEPVIAFLLHEVLKALVYLHSHGHIHRDVKAGNILIDDDGAVKLADFGVSTCMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSLGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKQMVATCLVKDPQKRPTSEKLLKHQFFKHARSRDYLAPTVLVGLAPLGGYKVKDAELLMQNKSLYENKDQLSQREYIRGISAWNFNLEDLRSQAALIEDENMPNAEEAAVTKKQRDTNDDAGLPAEGLSTSELNHSKEITTEVKEDGFSDFDDMQSSLASFTSKPLQALKGCFDVVEDDVNEMSPRGIDQENGKFKDESSGQRSFFRNNVVIEPKKHLSGSPLPDSVLSSKTFTVDSDRDHLQRRYHSERNLSGPMLYCPHRSTSNLSSVDDATDGAVIKCKGRFKMTSADLCPKTKCVVTPICGGSSSSTNLNLTASSVLPSLQSILRQNTVQMEEIVKLTKYVERTPGNHSELADSGQVDPSQVKHHVVIFCKNRCGK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01001 630 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01001 630 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Pte6g01001 630 MobiDBLite consensus disorder prediction 355 370 - -
Pte6g01001 630 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01001 630 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Pte6g01001 630 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte6g01001 630 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Pte6g01001 630 MobiDBLite consensus disorder prediction 349 378 - -
Pte6g01001 630 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 598 IPR047173 GO:0043539
Pte6g01001 630 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01001 630 Gene3D Transferase(Phosphotransferase) domain 1 97 292 - -
Pte6g01001 630 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 326 - -
Pte6g01001 630 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01001 Pte-Chr6 27813972 27822342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01001 1 598 MAP Kinase Kinase Kinase Kinase AT5G14720 64.630 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pte6g01001 Pkinase 2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01001 K08835 - qsa:O6P43_008957 849.736