Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00985 ATGGCACCCGGTTTAGAGGGTGAAAGTGGGTTCATGTTCAGTGACGAAGAACTGAGAGATATTAGTGGGGTGAAGATAGTTGGTGACTGTATAGAGGTCACGTGTGGATGTACCAGCCATAGGTATGGGGATGCTGTTGGGAGACTTAGGGTTTTCATTAATGGCTACCTTGAGATCGCTTGCCAATGCATCCCTGGTTGTCAGGAAGACAAATTGACCCCAGCAGCGTTTGAGAGACATTCTGGAAGAGAGTCGGCCAGAAAATGGAAGAACAATATCTGGGTTATTGTTGATGGGGAAAAGGTAGCTTTGTGCAAAACAATGCTGTTGAAGTACCACAATCAACTTTCAAAAAGTGCTAATGGATCACACAGGTCCCACAATGGACGCCATTGTCATCGTGATGAATTTGTTCGCTGTACTAGTTGCAAGAAAGAGCGCAGATTTCGTCTACGGACTAAAGAAGAGTGCCACATTTACCATGATGCTTTGGCAGATTCAAATTGGATGTGTGCTGACCATAGACATGACAAGATAAGTTGTGACGATGACGAAGAAAGAGGAAGTCGCAAAGTTTACAGGGGCTGCACACGTTCACCAACTTGCAAGGGCTGCACGTCTTGCGTCTGCTTTGGCTGTGATTTATGTCGCTTCTCAGATTGCAGCTGCCAGACTTGCACTGACTTCACTACAAATGCCAAAAAATAA 708 0.4534 MAPGLEGESGFMFSDEELRDISGVKIVGDCIEVTCGCTSHRYGDAVGRLRVFINGYLEIACQCIPGCQEDKLTPAAFERHSGRESARKWKNNIWVIVDGEKVALCKTMLLKYHNQLSKSANGSHRSHNGRHCHRDEFVRCTSCKKERRFRLRTKEECHIYHDALADSNWMCADHRHDKISCDDDEERGSRKVYRGCTRSPTCKGCTSCVCFGCDLCRFSDCSCQTCTDFTTNAKK* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00985 235 Gene3D - 27 143 IPR010919 -
Pte6g00985 235 ProSiteProfiles SAND domain profile. 16 104 IPR000770 GO:0003677
Pte6g00985 235 PANTHER PROTEIN ULTRAPETALA 1 11 234 IPR020533 -
Pte6g00985 235 SUPERFAMILY SAND domain-like 48 94 IPR010919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00985 Pte-Chr6 27523035 27525668 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Pte6g00985 SAND 1.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00985 - - gmx:100815782 434.106