Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00966 ATGCCGGATGTTCAGGCTCTTGTTAAAGACTTCATAAACAAGCTTAAGAAGCGTAAAATTGAGGGTTCACTAGCTACAGCAAAGCTGACAGCTGAGTTACTTCGTTCAGTTATTTCTCAACAGAGAGTGCCGTATACAAATCAGGCTGGTGCTTTGATAGATGCCGTAAGAGCTGTTGGGGAGCAGCTGATTGCTGCTAACCCTGTTGAATTGGCAGTGGGGAATATCGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCTCTCGCAACAGCTGCTATTGGTGGGTTGGGTTTATCAGCTGTAAGTGATGATGAAGGAAATGATGAGCGAGAAGACCACCAGGTTTTATCAGCTGCTGCCGTTGCTGCAGCTGCGAGAAGCACTTTGCGCCCACCATCATTGCAAACCCTCTTGGAGGATGTGCCTGATTCAAATGCTGTTCATCAAGCATCTTCCTCTGGGGGTGATTCTGAAGGAAAAAGCAGATCCGCTGATAGAAGTTCTAGAAGTCGGAGACTGAAGCATGATGTCATTGAGGCAGTAAATGAACTTATTCAAGATATTGCTACTTGCCATGAGCAAATAGCTGAACAAGCAGTGGAGCACATACATCAAAATGAGGTGATATTGACATTGGGCAGTTCAAGAACAGTACTTGAATTTCTTTATGCTGCTAAGGAGAAAAAAAGATCCTTCAGGGTATTTGTTACTGAGGGTGCTCCTAGGTATCAGGGACATCTCCTTGCAAAAGAATTAGTTGCCAGAGGTTTACAGACCACTTTGATTACAGATTCTGCTGTATTTGCCATGATATCCCGTGTGAATATGGTTATAGTTGGAGCTCATGCTGTCATGGCCAATGGTGGAGTCATTGCACCAGTGGGATTGAATATGGTTGCACTTGCAGCACAAAGGCATGCTGTCCCTTTTGTTGTTCTTGCTGGGAGTCACAAGTTGTGTCCTTTGTATCCTCACAATCCTGAGGTCTTGTTGAATGAGCTGAGATCACCATCTGAGCTACTCGATTTTGGAGAATTCTCCGATTGCATGGACTTTGGAAGTGGCACGGGTTCTTCTCTTCTGCATGTGGTTAATCCAGCATTCGATTATGTGCCACCAAAGCTTGTTAGTCTCTTCATAACTGACACAGGAGGGCATAACCCATCATACATGTATAGGCTTATAGCTGATTATTACTCTGCTGTGGATTTGGTGGTACAAGGAAGACCCGCCACTGGAAGTTTAGCTCACTAA 1263 0.4466 MPDVQALVKDFINKLKKRKIEGSLATAKLTAELLRSVISQQRVPYTNQAGALIDAVRAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLATAAIGGLGLSAVSDDEGNDEREDHQVLSAAAVAAAARSTLRPPSLQTLLEDVPDSNAVHQASSSGGDSEGKSRSADRSSRSRRLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLYAAKEKKRSFRVFVTEGAPRYQGHLLAKELVARGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGSGTGSSLLHVVNPAFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSAVDLVVQGRPATGSLAH* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00966 420 MobiDBLite consensus disorder prediction 143 161 - -
Pte6g00966 420 FunFam translation initiation factor eIF-2B subunit beta 194 402 - -
Pte6g00966 420 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Pte6g00966 420 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 408 - -
Pte6g00966 420 Pfam Initiation factor 2 subunit family 19 391 IPR000649 GO:0044237
Pte6g00966 420 Gene3D - 194 401 IPR042529 -
Pte6g00966 420 MobiDBLite consensus disorder prediction 143 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00966 Pte-Chr6 27236496 27242225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00966 1 409 Eukaryotic Initiation Factors Gene Family AT3G07300 82.238 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00966 K03754 - qsa:O6P43_029683 726.857