Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00960 ATGGTTCAGAAAAAGGTACCTTCCAAGCTTGGAATCCAAGCTGACCATGTTAAATCAGACAAGCACTTGGCAAACCTTAAACCAAGCCTCTCTCAGTACCAAGATGGGAAAAACAGAACAGCTGAGTTGAAGAAGAAAATGAAGAAGTCAAGATCAAACAAGCTTTCAGACTTGGAGGGCAACAGATCATCATCATCAACAACTTTGAGAAGAAATATATCCCAGCCAGGAAAACCACCACCACTGCATGTTACAACTTCTGCAGTTAGCTCACCACAGAAGCTGCAGTCTATCAGAGCTGCAGATGGCTCACCACAGAAGCAGCAGCCTTTGTTCAGAGCTGCAGATGGCTCGCCAAACTATATGAAGTCAACCAGCAGTTCAAGTGCAAAGAAGGAGCTTTCGTTGGTCAGCATTCGGAATACTCAAACTGGTTCTGAATGCAATACTAGGTGGAAAAACAAACTAAGCAATCCAACGCTTCGTTCTGTGGCAAAACCAGCTAGAACTTTAACTAGGGCTTCTAGTTTGAAGAAGGTGAGAGCTTTGACAAAGATTCCTAGTTTTAAGCTTACAAGAGGTCATAAGATAAAAACATCCGCAGTTGCTATGAGTGAAGACATAAATTTGCAGAAAGCAACATGTTCTTCAACTCTGAGAGATTCCAAATTTCCAGAATACCTGATGCTTAATCCTGGGGGTACTGAATGTGAGGGTACTTCGGTCGTCAAGGTTTGCCCTTATAATTATTGCTCTCTTAATGGTCATCACCATACTCCTTTGCCACCATTGAAAAGCTTCTTGTCGGCAAAGAGGCTTGCCTTGAAGACTCTGAAAAGTTTCAAACTTGAAGCAAGAAGCCCTCGGAGAGTGAAGGTAACTCAAGAAACAAAGAAAGCATATGATATCCAACAGAACTTCTTTGATGGAAGCCCGGCATATGATGAAGTCGATGTAGGAATTTCCAATATCTCGTCATCAACACAAAATGATGAGATGGACTATTTTATTCAAATTTATGTCAAGGATCATGAAGTGGAAGCATTCACAACGTGTTCACAACTAGCTGAATTTGAACAAAGTGATTCTACCAGAGGACTCGAGGGCCAGTATGACATCAACGCCACAAATGGGAAGCAAGTTGTTGCAGTAGATAGAGAGGAAGATATGATGCAAGTAATTGCAAGTGTGTCTGATGACTCACCAAAGTCGGAGATTGATTTTGAGGAATATTTCGCCGAGCAACATGCTGATATTGCAGATGAAAGTGAGACCTCACCTCGCTTGTTCGGCAATGAAACAACAGGTGAAGATTGTTGTGACAATACTTTCAAAGTGAAAAATTCAGACAGTTTTACAGAAGCATGTTGTCTAGCAACTGATATGGAATGGGAGGAAGGAGATTTGTCTATTATAGAGCTCAGTGATGAAGGTAATATCCCAATGCCAAACAGCGAGGTTCTTGAATCAAAATTTGAGTGTTTGTCAGGAATTTATGATTCTTATGATGAACATACCTTGTGGACAGAGGGCATAAATGGTATTCACAGAAAATATATTATGGCTTCTGAAGCTGTTCAAGAAGCTTCTTTTGAAGAAAATTTCAGAGTCGGAGCACAATTTGATGGCAAAGATGTTGAAACTGAAGACTTAAGTCCAAAAATGCAGAGTCCTGTAATATATGAAGCGCCTAAGAGCCTCCCTTTTCATAAGCTTTCAGAATCTGTGTATTCATTTCATGATCTCCCAAATTCAGAAGAAACGAGAGATATTATGCTGTTCACTACAATCAGTATGACATCTTCAGATTTGGCAGAGGAGACAATCCGAGAAATCGAGGAAGAAAATTATCAAACTCCTAGATATGAGGTTCTGCTGCCTGAAAATCCTTCAAGTCTCGTCGATCGCATGGAAAGTGACAGGGTTGGAGCACTGCATGAAGCTTTTAATAGTGAAAAGGATCGTGAGAGACTAGAAGACAGTGGTCCAGTAAAATGTTCCAATGACTTGATCTCCAATTCTTCTCAGGTCCTTCAGGAATTTGGTCAAGTGAAATCAGAGGGAGAATACAGAAATGAAACAATTGAAAATCCAAAAGAGTGTCAAGGAGCTGCAAGTGAAATTTCTGTTCAAGAAGAGGAACTCAAGAAAGTCATTGCTAGAGATGAAGCGGAAAAAGAGGAGCAAAAAGGTTCTGCAGAATCAGAAGTTTGTTCAATGGATATTGGATACCATCCAGAACCAGCAGCTGAAGTTGACAATTTCATCGGTGCAGATAAAAAGAAAACTTTGGTTTCCCAAGAATTGTCGGACATTTTATGCAGTTGGAAATATTCAAGGAGAGGAAAGAGACCCGCAACTGATGATGAAAAACTGTGGAAGTTTAATCCTCGAGAACCAAATTACTTGCCACTGATTCCTGATCCAGAAGCAGAGAAAGTAGACCTCAAGCATCAGCTAATGGATGAGAGGCGAAGTGCAGAAGAGTGGATGATAGATTTTGCACTCCAACAAGCTGTCACAAAACTTGCTCCAGCGAGGAAGAGGAAGGTAGCCCTTCTTGTGGAAGCTTTCGAAACAGTGATTCCGATACCGAAATATGAAAGTCATATACAAAACACATCTGCATTTACACATCATAGACCCATGCAGGCCTGTAGCTGA 2664 0.4088 MVQKKVPSKLGIQADHVKSDKHLANLKPSLSQYQDGKNRTAELKKKMKKSRSNKLSDLEGNRSSSSTTLRRNISQPGKPPPLHVTTSAVSSPQKLQSIRAADGSPQKQQPLFRAADGSPNYMKSTSSSSAKKELSLVSIRNTQTGSECNTRWKNKLSNPTLRSVAKPARTLTRASSLKKVRALTKIPSFKLTRGHKIKTSAVAMSEDINLQKATCSSTLRDSKFPEYLMLNPGGTECEGTSVVKVCPYNYCSLNGHHHTPLPPLKSFLSAKRLALKTLKSFKLEARSPRRVKVTQETKKAYDIQQNFFDGSPAYDEVDVGISNISSSTQNDEMDYFIQIYVKDHEVEAFTTCSQLAEFEQSDSTRGLEGQYDINATNGKQVVAVDREEDMMQVIASVSDDSPKSEIDFEEYFAEQHADIADESETSPRLFGNETTGEDCCDNTFKVKNSDSFTEACCLATDMEWEEGDLSIIELSDEGNIPMPNSEVLESKFECLSGIYDSYDEHTLWTEGINGIHRKYIMASEAVQEASFEENFRVGAQFDGKDVETEDLSPKMQSPVIYEAPKSLPFHKLSESVYSFHDLPNSEETRDIMLFTTISMTSSDLAEETIREIEEENYQTPRYEVLLPENPSSLVDRMESDRVGALHEAFNSEKDRERLEDSGPVKCSNDLISNSSQVLQEFGQVKSEGEYRNETIENPKECQGAASEISVQEEELKKVIARDEAEKEEQKGSAESEVCSMDIGYHPEPAAEVDNFIGADKKKTLVSQELSDILCSWKYSRRGKRPATDDEKLWKFNPREPNYLPLIPDPEAEKVDLKHQLMDERRSAEEWMIDFALQQAVTKLAPARKRKVALLVEAFETVIPIPKYESHIQNTSAFTHHRPMQACS* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00960 887 MobiDBLite consensus disorder prediction 1 133 - -
Pte6g00960 887 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 863 IPR044681 GO:0005516
Pte6g00960 887 MobiDBLite consensus disorder prediction 57 104 - -
Pte6g00960 887 MobiDBLite consensus disorder prediction 119 133 - -
Pte6g00960 887 Pfam Plant calmodulin-binding domain 787 863 IPR012417 GO:0005516
Pte6g00960 887 Coils Coil 710 730 - -
Pte6g00960 887 SMART CaM_binding_2 752 863 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00960 Pte-Chr6 27121110 27124462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00960 767 888 Calmodulin-binding Proteins AT2G38800 55.738 3.12e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00960 - - jre:108981189 578.556