Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00951 ATGGCCAAGAAAAGCTGGTTAAATCTCGTGAGAAGTTTCTTTACACGGGAGAAGAAGTCAAAACAACAAAACAAAGAGAAGAAAAGGAGATGGTTTTTTGGAAGGCTCACAGTGAAGAGGTTACCCTCAATTTCTGCTGCTCCATTATCATCAAATCACAGAAAAATGAACGAAGCAGAGCAAGAACAGAGCAAACATGCTTTGACTGTGGCCATCGCTACTGCAGCAGCAGCCCAAGCTTGTGTTGCTGCTGCTCAGGTTGCGACTGAAGTTGCAAGACTGACGAGTATTTCAGAACCAATCCATGGTTGTAAAGAGAAGGAGCAAGACATCCCACAAATTATTTCCAAAACTGATTCCATATATAAAGAGGAAAAAGAAAAATCTGCATCCATTAAAATCCAAGCTGCTTTTCGTGGTTACCTTGCAAGGAAGGCTCTGCGGGCATTGAAGGGAATTGTGAAGCTCCAAGCTTTCATTCGCGGCAGGCTTGTGAGACATCAAGCTGCCAGTACCCTTAAGTGTTTGCAGTCTATTGTGAGTATCCAGTCGCAGGTCTTTGCAATGAGGTTACAAATGACTGAAAAGAAATGTAAATATGATGACATGGAGGATAAGCTGAGTTTGACAGGCAATATCATAAGGGAGGATTTAAAGAGAGAAAGAAGATGGGATGACGGCATTATGTCAAAGGAAGCGACTGATGTTTCTTACATAAGCAAAAAAGAAGCTATGATGAAGAGAGAAAGAATCAAAGAATACGCATTTAGGCACAGGAAATCAGCAGAAACAGAAAGAAGTAACGTAAATGGAAGATGGAGATACTGGCTAGAGCAATGGGTGGACACCCAACTTTCCTCGAGTAAAGAATTTGAAGATTTGGACTCAGTTATAAGATCGAATTCTAAACTCAAAGAAGAAGATGGAGGAAGACAAGTAAGGCTAAAAGCTATCCGGAGGCGATTTCCTAATGAAGAAACGGCTTCTCCAACTTGTATGTCAAGAAAATCAAAATATCAAAGGAAACGAGGTGGGTCGTCTTTGGTAGATGAGAATTCACTTTCAAGTCCTCCTGGAGTTCCAACTTACATGGCTGCAACTGAATCTGCTAAAGCAAAAGTGAGATCGACAAATATTTCACCGAAGCTAAGGCCCTTGAGTTTTGATACTTTTTCTGAAAGTTACTCACCTTACAAGAACAATATGTGTCTGGTGTCTTCAGTAAACAGTGAAGGTCTTACTGTTGGTGGAATGGCGAAGCATAGTGCTTATCATCAAAGATCTCCAAGCATGAAAGGCCTTCCAGTTGGCCCTGTAAAATCAAGCCGGATGAGAAAGGATCTTAGCTTTGGTTCAGAGAGTTCACTGCCCAATTGGGATTAA 1383 0.4136 MAKKSWLNLVRSFFTREKKSKQQNKEKKRRWFFGRLTVKRLPSISAAPLSSNHRKMNEAEQEQSKHALTVAIATAAAAQACVAAAQVATEVARLTSISEPIHGCKEKEQDIPQIISKTDSIYKEEKEKSASIKIQAAFRGYLARKALRALKGIVKLQAFIRGRLVRHQAASTLKCLQSIVSIQSQVFAMRLQMTEKKCKYDDMEDKLSLTGNIIREDLKRERRWDDGIMSKEATDVSYISKKEAMMKRERIKEYAFRHRKSAETERSNVNGRWRYWLEQWVDTQLSSSKEFEDLDSVIRSNSKLKEEDGGRQVRLKAIRRRFPNEETASPTCMSRKSKYQRKRGGSSLVDENSLSSPPGVPTYMAATESAKAKVRSTNISPKLRPLSFDTFSESYSPYKNNMCLVSSVNSEGLTVGGMAKHSAYHQRSPSMKGLPVGPVKSSRMRKDLSFGSESSLPNWD* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00951 460 Pfam IQ calmodulin-binding motif 151 168 IPR000048 GO:0005515
Pte6g00951 460 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
Pte6g00951 460 MobiDBLite consensus disorder prediction 420 460 - -
Pte6g00951 460 SMART iq_5 126 148 IPR000048 GO:0005515
Pte6g00951 460 SMART iq_5 149 170 IPR000048 GO:0005515
Pte6g00951 460 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Pte6g00951 460 PANTHER IQ-DOMAIN 5-RELATED 1 409 - -
Pte6g00951 460 Pfam Protein of unknown function (DUF4005) 330 420 IPR025064 -
Pte6g00951 460 MobiDBLite consensus disorder prediction 324 359 - -
Pte6g00951 460 Gene3D - 124 178 - -
Pte6g00951 460 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00951 Pte-Chr6 27011563 27014188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00951 1 460 IQD Protein Family AT5G13460 43.067 2.72e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00951 - - qsa:O6P43_029632 441.425