Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00949 ATGGAGAAATATCTGAGAGACAACTTTGACGTCGAGCACAAAAGACCTTCAGAGGAAGCCTTGAGGAGATGGAGATCTGCTGTCGCCGTAGTCAAGAATCCTCGCAGGCGATTCCGTATGGTCGCCGATCTCACCAAGCGCGCGGAGGCTCAACGGAAACGCAGGAAAATACAGGAAAAGCTACGTATAGCTCTTTATGTACAGAAAGCGGCATTACAGTTCATTGCCGCAGCAGGAAAATATAGTGGCAGATACATGCTCACGAAGGGAGTGAAAAATGCTGGATTCAACATTGAACCCGATGAACTCACCTCTATTACTGGATCTCGTGATAACAAAGCTTTAGAACATTTTGGAGGAGTTGAAGGAATAGCAAGAGAGTTATCTGTTTCTTTGAAAAATGGTATCAACTCAGGAAATGTATCTTGCAGACAACGTATTTTTGGCTTCAACCGTGTCCCTGAGAAGCCTCCTAGGACCATTTGGATGTTTATATGTGACGCAGTGCAGGACTTGACTTTGATTATTCTCATGATATGTGCAGTTGTTTCCGTAGGTGTTGGAATTGCCACCGAAGGGTTGCCAGAAGGTATGTATGATGGAGTGGGAATATTGTTGTCTATATTTTTAGTGGTCATAGTCACCGCAGTAAGTGATTATAAGCAGTCCTTGCAATTCAAGGATTTGGATAAGGAGAAGAAGAATATTACCATGCAAGTCACTAGGGATGGACGTAGACAAAATGTCTCTATATTTGATATAGCAGTTGGAGATATTGTTCATCTCTCAATTGGTGACATAGTTCCCGCAGATGGACTGTATATTTCAGGATACTGCTTATCTGTTGATGAATCAAGTTTGTCAGGTGAGAGTGAGGCGGTACATGTAAACCAAGATAATCCTTTTCTTCTATCTGGTACCAAAATTCAAGATGGGTCCGCAAAAATGTTGGTGACTTCTGTGGGTATGAGGACTGAATGGGGAAGGTTGATGGCTACACTGGATGAAGGAGGAATGAATGAGACACCATTACAGGTCAAATTAAATGGAGTTGCCACGATCATTGGAAAAATTGGCTTGGCTTTTTCTGTGCTGACATTTTTGGTCTTGACTGGAAGATTTTTGTTGCAAAAAGCTATGGATGATAGGATCAGCATCTGGAACTTAGAAGATGTGAGACAGCTCCTTTATTTCTTCGCCACGGCAGTGATTATTATTGTTGTTGCAGTTCCAGAGGGACTTCCTTTAGCAGTGACATTAAGTCTTGCCTTTGCAATGAAGAAATTAATGAATGATAAGGCACTGGTGAGACACCTCTCTGCATGCGAGACAATGGGCTCTGCTAGTTGTATATGCACCGATAAGACTGGGACTTTAACAACAAACCATATGATAGTAAATAAAATATGGATTGCAGATAAAAACATACCAATAGAAGGTAATGTAAGTGGGAGTGCTCTGAAATCCTCAGTAGCTGAGCAAGTTCTTCATATCCTTATGCAATCTATATTCCAGAATACTGGTGCTGAAGTTGTCAAGAGCACTAACGGAGAGAATAAGATATTGGGTTCTCCTACTGAGACAGCAATTATAGAATTTGGCTTGCTTTTGGGAGGTGATCCTAGGGCTTATGGCGAAGAGTACAAGATAGTGAAGGTTGAACCTTTCAATTCAATCAAGAAAAAGATGTCTGTTCTCGTGTCTCTACCAGGTACTGACGGCTTAAGAGCATTCTGCAAAGGAGCATCAGAAATAGTACTAAAATTGTGCGATAAAGTTATTGGAGCTGATGGGGTTGCAACTCCTATATCGGAGGATCAAAGAGAGAATATCACAAATATCATAAATGGTTTTGCTTCTGAAGCTTTGAGAACTCTCTGCCTGGCTTTCAGGGACATAAAAGATCATTCTGGTTCTGATAATATTCCTGAAGAAAATTATATATTAATTGCAGTAATTGGAGTTAAGGATCCAGTACGTCCAGGAGTTAAAGAAGCTGTGAAGACTTGTTTAGCTGCTGGGATAGTTGTGAGGATGGTTACTGGGGACAATATCTATACTGCTAAAGCTATAGCCAAAGAATGTGGCATCTTGACTGACGGTTTAGCTATAGAAGGTGCAGACTTTCGTACCATGAACACACAGCAGATGCAGGAGGTGCTACCAAAGCTACAGGTAATGGCTCGCTCTTCGCCTTCAGACAAGCACACCTTAGTGACATACCTCAGAAACGGGTGTGAGGAAGTTGTCGCAGTGACTGGCGATGGAACCAATGACGCCCCAGCATTGCATGAGGCAGACATTGGACTTGCAATGGGTATAGCTGGAACAGAGGTTGCAAAAGAAACTGCAGATGTCATTGTTCTGGATGACAATTTTAAAACCATAGTAAGTGTTGCAAGATGGGGACGTTCTGTTTATATTAACATCCAGAAGTTTGTGCAGTTCCAGTTGACAGTGAACATTGTTGCTCTCATGCTCAATTTCATTTCTGCATGTGCTTCAGGATCTGCTCCTCTTACCGCTGTGCAAATGCTCTGGGTGAACATGATCATGGACACATTAGGTGCATTAGCACTTGCAACAGAACCCCCTCATGATGGACTAATGAAAAGACCACCTGTCGGCAGGAATGTTCACTTCATAAATGGAATCATGTGGAGGAATATAATTGGTCAGAGTATCTATCAGATTATTATACTTTTGGGTCTCGAGTTTGAGGGTGAACGTCTCCTGCACCTCAGCGGTCCACATGCAACTTCTGTTCTCAACACATTCATATTCAATACTTTCGTCTTTTGCCAGATTTTTAATGAGATTAACAGCCGTGACATGGAGAAGATTAATGTTTTCAGAGGCATATTTAGCAGTTGGGTTTTTATTGCTGTCATGATCACAACCATTTGTTTCCAAGTCATAATAGTTGAATTTCTGGGTGCCTTTGCAAAGACAGTTCCATTGAGCTGGGAGTTGTGGTTAGCCAGTGTTGTGATTGGAGCTGCAAGTTTAGTTGTGTCAGTTGTCCTCAAGTTTATTCCTATCACACCTTCTGATCGCACAGCCAAACCTCATGATGGTTACGAGCCACTGCCAACAGGTCCAGAACAGGTATAA 3114 0.42 MEKYLRDNFDVEHKRPSEEALRRWRSAVAVVKNPRRRFRMVADLTKRAEAQRKRRKIQEKLRIALYVQKAALQFIAAAGKYSGRYMLTKGVKNAGFNIEPDELTSITGSRDNKALEHFGGVEGIARELSVSLKNGINSGNVSCRQRIFGFNRVPEKPPRTIWMFICDAVQDLTLIILMICAVVSVGVGIATEGLPEGMYDGVGILLSIFLVVIVTAVSDYKQSLQFKDLDKEKKNITMQVTRDGRRQNVSIFDIAVGDIVHLSIGDIVPADGLYISGYCLSVDESSLSGESEAVHVNQDNPFLLSGTKIQDGSAKMLVTSVGMRTEWGRLMATLDEGGMNETPLQVKLNGVATIIGKIGLAFSVLTFLVLTGRFLLQKAMDDRISIWNLEDVRQLLYFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMIVNKIWIADKNIPIEGNVSGSALKSSVAEQVLHILMQSIFQNTGAEVVKSTNGENKILGSPTETAIIEFGLLLGGDPRAYGEEYKIVKVEPFNSIKKKMSVLVSLPGTDGLRAFCKGASEIVLKLCDKVIGADGVATPISEDQRENITNIINGFASEALRTLCLAFRDIKDHSGSDNIPEENYILIAVIGVKDPVRPGVKEAVKTCLAAGIVVRMVTGDNIYTAKAIAKECGILTDGLAIEGADFRTMNTQQMQEVLPKLQVMARSSPSDKHTLVTYLRNGCEEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKETADVIVLDDNFKTIVSVARWGRSVYINIQKFVQFQLTVNIVALMLNFISACASGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPVGRNVHFINGIMWRNIIGQSIYQIIILLGLEFEGERLLHLSGPHATSVLNTFIFNTFVFCQIFNEINSRDMEKINVFRGIFSSWVFIAVMITTICFQVIIVEFLGAFAKTVPLSWELWLASVVIGAASLVVSVVLKFIPITPSDRTAKPHDGYEPLPTGPEQV* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00949 1037 Gene3D - 167 1012 - -
Pte6g00949 1037 Gene3D - 449 798 IPR023214 -
Pte6g00949 1037 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Pte6g00949 1037 FunFam Calcium-transporting ATPase 770 1016 - -
Pte6g00949 1037 Pfam E1-E2 ATPase 236 430 - -
Pte6g00949 1037 SUPERFAMILY Calcium ATPase, transduction domain A 236 332 IPR008250 -
Pte6g00949 1037 Pfam haloacid dehalogenase-like hydrolase 450 767 - -
Pte6g00949 1037 Pfam Cation transporting ATPase, C-terminus 838 1012 IPR006068 -
Pte6g00949 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Pte6g00949 1037 SUPERFAMILY HAD-like 451 858 IPR036412 -
Pte6g00949 1037 FunFam Calcium-transporting ATPase 214 335 - -
Pte6g00949 1037 FunFam Calcium-transporting ATPase 462 658 - -
Pte6g00949 1037 Gene3D - 16 76 - -
Pte6g00949 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 663 IPR023299 GO:0000166
Pte6g00949 1037 Gene3D - 135 335 - -
Pte6g00949 1037 SFLD Haloacid Dehalogenase 434 805 - -
Pte6g00949 1037 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Pte6g00949 1037 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Pte6g00949 1037 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Pte6g00949 1037 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Pte6g00949 1037 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Pte6g00949 1037 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Pte6g00949 1037 NCBIfam calcium-translocating P-type ATPase, PMCA-type 112 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pte6g00949 1037 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00949 1037 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00949 1037 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00949 1037 SMART Cation_ATPase_N_a_2 117 189 IPR004014 -
Pte6g00949 1037 SFLD p-type atpase 434 805 IPR044492 -
Pte6g00949 1037 Gene3D - 462 658 IPR023299 GO:0000166
Pte6g00949 1037 NCBIfam HAD-IC family P-type ATPase 718 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00949 1037 NCBIfam HAD-IC family P-type ATPase 385 505 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00949 1037 FunFam Calcium-transporting ATPase 16 76 - -
Pte6g00949 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1014 IPR023298 -
Pte6g00949 1037 FunFam Calcium-transporting ATPase 648 798 - -
Pte6g00949 1037 PANTHER CATION TRANSPORTING ATPASE 69 1014 - -
Pte6g00949 1037 Pfam Cation transporter/ATPase, N-terminus 116 184 IPR004014 -
Pte6g00949 1037 CDD P-type_ATPase_Ca_PMCA-like 144 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00949 Pte-Chr6 26989584 26994713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00949 57 1034 Primary Pumps ATPases AT3G57330 66.803 0.0 1329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00949 K01537 - qsa:O6P43_001417 1571.6