Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00947 ATGGCTTCCAATTCCTTTCGCTGTTTCACTCCAACCGACTTCTTCGAATTCTCACCTGAGGTGATACACAAGACCATGGATGATGGAGAGATGAAACTTCCAGATCATATTCTTTTATCAAATATTATGGATTCATTTGTCAACTGCACAGTACCAACGACTGGAGCTATGGATGAAGAATTCATTAACACTGAGACTTGCACCCATACTCATACATGCGATCCTCCTGGTCCTGATGCAACTCACACACACACATGCTACCACTTTCATACCCAAGTCATAGCATCTCAAGCAGATCCCGCCCATGTGAATGACAAACAGCATGAGAACTTGAGTTGTCAGAAAAAGCCCCAAGGTAACAGAGAAGCTGTTCGTAAATATAGAGAGAAGCAGAAGGCACGCTTGGCTTCATTGGAAGTGGAAGTTCAGAATTTACGCTCGGTGAACAATGAATTACAGGAAAAACTGAAAACCATGGAGCTTATTGAGCAAGAACTGATGATGTTGAAGACGCTTGTTGTGAATCTCAAACTGAAGATTGACAGTGAGTTTAGTGTTTTAGGCTTTCTAAAGCAGCCTAAGTAA 585 0.4188 MASNSFRCFTPTDFFEFSPEVIHKTMDDGEMKLPDHILLSNIMDSFVNCTVPTTGAMDEEFINTETCTHTHTCDPPGPDATHTHTCYHFHTQVIASQADPAHVNDKQHENLSCQKKPQGNREAVRKYREKQKARLASLEVEVQNLRSVNNELQEKLKTMELIEQELMMLKTLVVNLKLKIDSEFSVLGFLKQPK* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00947 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 114 176 IPR004827 GO:0003700|GO:0006355
Pte6g00947 194 Gene3D - 102 177 - -
Pte6g00947 194 SMART brlzneu 108 175 IPR004827 GO:0003700|GO:0006355
Pte6g00947 194 CDD bZIP 114 160 - -
Pte6g00947 194 Pfam Basic region leucine zipper 114 160 IPR004827 GO:0003700|GO:0006355
Pte6g00947 194 SUPERFAMILY Leucine zipper domain 115 161 IPR046347 GO:0003700|GO:0006355
Pte6g00947 194 PANTHER CCAAT/ENHANCER BINDING PROTEIN 57 184 IPR031106 GO:0003700|GO:0006351
Pte6g00947 194 Coils Coil 128 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00947 Pte-Chr6 26952948 26953536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00947 26 191 bZIP Transcription Factor Family AT2G16770 42.771 4.60e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g00947 bZIP_2 9.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00947 K25785 - tcc:18585722 172.94