Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00926 ATGTATGGTGATGGCCCTGGTAGGACAATTGTCACCGGCAGCAGGAACAACCACAGGGGTTGGTCTACTTTGGAGTCCGCCACTTTCTCGGTTGTGGCAAATGGATTTATTGCTAAGGATATGGAGTTCCAGAACACAGCTGGATCTCATCAAGGTCAAGCAGTGGCATTCAGAGTCGAAGGAGACATGTCAGCTTTCTTCAGCTGCAGGATGGATGGATATCAAGACACCTTATGGGTTCAAGCCAACCGTCAGTTCTACCGTGACTGTGTCATCTCAGGCACTATAGACTTCATCTTTGGTGACTCTTTCGCTGTTATTCAGAACTCTCATATCATTGTTAAGAGGCCAGCTAATGGACAATTCAACCTTATAACAGCCCAAGGTAGGTCTGACCCGCTTGAACCAACAGCCATTGTTATACACAGCTGCAAGATTATTGCAGGCCAGAGGTTAATCAGTGATCAGCTTCAGTTCAAGAGCTATTTGGGGAGGCCTTGGAAGCCATTAGCAACAACAGTAATTATGGAATCTGACTTGGGAGGGTTTCTTGATCCACAAGGATGGTCCCCTTGGAACGAAACCACTCCTCCTTCTGACTTGTTGTTCTATGCCGAGTATGCCAATACTGGACCTGGTGCTGCTGTCAATGGCAGAATCAACTGGCCGGGTTTCCATGTGATTGACAAGGCCACTGCTCTGAAGTTTACTCCTGACCTGTACCTCGAAGCAAGCGGTATCTGGTTGCAGGACACTGGTTTTCCAGTCCAGTATGAATTGCTCTGA 786 0.4758 MYGDGPGRTIVTGSRNNHRGWSTLESATFSVVANGFIAKDMEFQNTAGSHQGQAVAFRVEGDMSAFFSCRMDGYQDTLWVQANRQFYRDCVISGTIDFIFGDSFAVIQNSHIIVKRPANGQFNLITAQGRSDPLEPTAIVIHSCKIIAGQRLISDQLQFKSYLGRPWKPLATTVIMESDLGGFLDPQGWSPWNETTPPSDLLFYAEYANTGPGAAVNGRINWPGFHVIDKATALKFTPDLYLEASGIWLQDTGFPVQYELL* 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00926 261 ProSitePatterns Pectinesterase signature 2. 92 101 IPR033131 -
Pte6g00926 261 SUPERFAMILY Pectin lyase-like 1 255 IPR011050 -
Pte6g00926 261 Pfam Pectinesterase 1 243 IPR000070 GO:0030599|GO:0042545
Pte6g00926 261 Gene3D - 1 260 IPR012334 -
Pte6g00926 261 PANTHER PECTINESTERASE 1 250 - -
Pte6g00926 261 FunFam Pectinesterase 4 1 260 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte6g00926 Pte-Chr6 26562433 26563656 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00926 1 260 Carbohydrate Esterase AT4G33230 48.462 2.18e-84 262