Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00925 ATGATACGGAAGAACATTATTCTTACTGCCGTTTCGGTCATTCTGGTTATCGGTCTTGCAATTGGTATTGTGTTTGAAATCCAACATTTGAATAGTACTATCAACAAGGGTAAACGAGATGAGGAGGAGCTCTCAAATCGGAATAACGCTGTTGTTTCACTGTGCAAGAAAACGAATGATGAAAATCTTTGCCATCAAACCCTTGATCCTGTAAATAGCACTCACCCAATGGACTACGTCAAGGCTGCAGTTAAAGCAACAATGGACCACGTTTTTAAATCGTTGAACACGTCTGACAAACTTATACTTCAAGCTAGCCATAGCCCGAGAACTAAAATGGCTATAGGTGATTGCAAGGAATTGCTGCAGTCTGCTAAGCATGAACTTGAAGCAATATTATCCACTAATGGTGATAGTGATGATCTCCAAAAGGTGCATGATAGTTCTTATCACTTTAAGGTCTGGTTGAGTGCTGTGATCTCATACCAACAATCATGTCTTGATGGGTTTGGAGAAGATGTAAAAATTGACCAGAAGTTCTTGGAAGACATGAAAACTGGCGGTTTGCTTGATGCTGGCAAACTCACTAGCTTGTCACTTGCTATTGTTCACGAGGTATCAGATAGTCTTCTGTACTTAGGGTTTGAAATTGATGCAAAGCGTGGCTCTCGTCGTCTTCTAGGGACAGAAAAAGATGATTATCCAACGTGGTTTTCTGCTACTGGTCGTGACCTTCTTGAGTCATTGGCAATGGAGGAATGGCGAATGCTGTTGTGGCCAAAGATGGCAGTGGTCAATTTACCACCATCAATGATGCACTTGCCGCTATCCCCCCGAACAATGTTAAAAGATATGTGA 858 0.4172 MIRKNIILTAVSVILVIGLAIGIVFEIQHLNSTINKGKRDEEELSNRNNAVVSLCKKTNDENLCHQTLDPVNSTHPMDYVKAAVKATMDHVFKSLNTSDKLILQASHSPRTKMAIGDCKELLQSAKHELEAILSTNGDSDDLQKVHDSSYHFKVWLSAVISYQQSCLDGFGEDVKIDQKFLEDMKTGGLLDAGKLTSLSLAIVHEVSDSLLYLGFEIDAKRGSRRLLGTEKDDYPTWFSATGRDLLESLAMEEWRMLLWPKMAVVNLPPSMMHLPLSPRTMLKDM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00925 285 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 205 IPR035513 -
Pte6g00925 285 SMART PMEI_2 46 202 IPR006501 GO:0004857
Pte6g00925 285 NCBIfam pectinesterase inhibitor domain 45 176 IPR006501 GO:0004857
Pte6g00925 285 PANTHER PECTINESTERASE 16 246 - -
Pte6g00925 285 CDD PMEI-like_3 53 207 - -
Pte6g00925 285 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 207 IPR035513 -
Pte6g00925 285 FunFam Pectinesterase 47 207 - -
Pte6g00925 285 Pfam Plant invertase/pectin methylesterase inhibitor 50 202 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00925 Pte-Chr6 26561516 26562373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00925 1 246 Carbohydrate Esterase AT3G62170 29.434 8.23e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00925 K01051 - qsa:O6P43_007317 183.341