Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00923 ATGACGAAGCCGGGTGCGACGGTGAAAGAGAGAATGAACGGCAACAAGAACAGTAAGTTAAAGAAAGGTTTGTGGTCTCCTGAAGAAGATGAGAAGCTCTTAAGGTACATGTTAACTAATGGTCAAGGGTGTTGGAGCGAGATTGCCAAGAATGCTGGCCTACAAAGATGCGGGAAAAGCTGCCGTCTTCGTTGGATTAATTACTTGAGACCTGACCTCAAGCGCGGTGCATTTTCGCCAGAAGAAGAAGAGCTCATTGTTCAATTGCATTCTATATTTGGCAACAGGTGGTCTCAGATTGCAGCACGACTTCCTGGACGAACTGACAATGAAGTTAAGAATTACTGGAACTCTACGTTGAAGAAAAGGTTGAAAAACGACACCAACTCCACTCCATCACTCAATAATACCAAGTCTGAGGCTGCTGATTTTTCGAGTATAATACTCCCTGTCAGTGAATGTGATCGAATTACCGTTAGCATGGACTCACCACCTTCTTCATCTTCCTCCTTGCAATCCATGGCATTTGGAAATCAATTTGTTCCTTTTCCGATATTCCATAACATCTGTGACAATACGACGGGTTCGACTGATTTTCATCCATGCTTAACGCAAGAGGGTGTTAGAGATGGCGTCTATGGTGATTATGGAAAATTAGAGCCTAGAATGATGGGGTCAGATAGAGACCTCTCTCTTCCTTCTCTTGAGAATAGATCCGGAAGCATACAAGATAATTGGCCTCCAGTCGAAGTGAAAATCAATGACAACCAACTCAGTAATAATGATTGCTTGAATAACACTGAAGGATTGTGCCTGAACATAGCGGACTCATTCGGCTTTGAAAATCATTATCAGGGTGACCCATTAAGAAATCAAGAATATTGGAACTTAGAGGCTCTTATGATGCAGGACATATCCTCTTTTAATTATTCCTTTCCTTGA 942 0.4225 MTKPGATVKERMNGNKNSKLKKGLWSPEEDEKLLRYMLTNGQGCWSEIAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPEEEELIVQLHSIFGNRWSQIAARLPGRTDNEVKNYWNSTLKKRLKNDTNSTPSLNNTKSEAADFSSIILPVSECDRITVSMDSPPSSSSSLQSMAFGNQFVPFPIFHNICDNTTGSTDFHPCLTQEGVRDGVYGDYGKLEPRMMGSDRDLSLPSLENRSGSIQDNWPPVEVKINDNQLSNNDCLNNTEGLCLNIADSFGFENHYQGDPLRNQEYWNLEALMMQDISSFNYSFP* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00923 313 FunFam MYB transcription factor 19 75 - -
Pte6g00923 313 CDD SANT 77 120 IPR001005 -
Pte6g00923 313 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Pte6g00923 313 MobiDBLite consensus disorder prediction 1 22 - -
Pte6g00923 313 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Pte6g00923 313 PANTHER MYB DOMAIN PROTEIN 55 15 158 - -
Pte6g00923 313 Gene3D - 76 145 - -
Pte6g00923 313 SMART sant 21 71 IPR001005 -
Pte6g00923 313 SMART sant 74 122 IPR001005 -
Pte6g00923 313 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Pte6g00923 313 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Pte6g00923 313 CDD SANT 25 69 IPR001005 -
Pte6g00923 313 FunFam Myb transcription factor 77 124 - -
Pte6g00923 313 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Pte6g00923 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Pte6g00923 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Pte6g00923 313 Gene3D - 19 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00923 Pte-Chr6 26438977 26440751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00923 1 312 MYB Transcription Factor Family AT5G12870 43.987 1.14e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte6g00923 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00923 K09422 - qsu:112038777 333.954