Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00922 ATGGCATTTTACGGAAAACTCAGATCGGGCATCTCCCGTATCAACAAGTTTGGGTACCTCTACTCTGACTCTCTCCCTGCTCAGAGATCCACACTCCATCACGCGGATTTGAGGAACTACTCTACCTCAGCTGTTCAAAAGCAAGAGAAAGTAAAGGTGCCATTGTCATTGTTTGGGGGCTCTGGAAATTATGCCTCTGCTCTGTACATCACAGCTGTAAAAGCTAATGCAATTGAGAAGGTTGAAGCTGAGCTACTTGATCTTGTTGAGGCTACAAAGAAAAGCCCAACATTTTCCCAGTTTACAAAGGATCTATCTGTTCCTTCAGATGTCAGAGTTAAGGCTGTGGAGGCAATCTGCAGTGAAGCAAAATTTTCTGAACTTACGAAGAAATTCCTAGTTGTTGTGGCTGACAATGGAAGGTTGAGGTATGTAGATAGCATCACAAAGAAGTTTTCAGAGCTCACCATGGCTCACAAGGGAGAAGTGAAAGCTGTAGTGACCACAGTTGTTCCCCTTCCTACTGCGGAGGAGAAAGAACTAATAGAAACCCTGCAAGACATTATCGGACAGGGGAAGAAGATTAAGGTTGAACAAAAGATTGACACCAGCATACTTGGAGGGCTTGTTATCGAGTTTGGCCAGAAGGTGTTTGATTTGTCCATCAAGACTAGGGCTCAGCAAATGGAGAGGCTTCTTCGAGAGCCTATTAATATTTCGAACCTGATTGGTTATGTAATTGCCTCGGGAAGTAATAGAATAAGATCTCAAAGCAAACAATTCTTTGGTGATGATATTGGATTGTGA 807 0.4312 MAFYGKLRSGISRINKFGYLYSDSLPAQRSTLHHADLRNYSTSAVQKQEKVKVPLSLFGGSGNYASALYITAVKANAIEKVEAELLDLVEATKKSPTFSQFTKDLSVPSDVRVKAVEAICSEAKFSELTKKFLVVVADNGRLRYVDSITKKFSELTMAHKGEVKAVVTTVVPLPTAEEKELIETLQDIIGQGKKIKVEQKIDTSILGGLVIEFGQKVFDLSIKTRAQQMERLLREPINISNLIGYVIASGSNRIRSQSKQFFGDDIGL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00922 268 PRINTS ATP synthase delta subunit signature 60 79 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 PRINTS ATP synthase delta subunit signature 193 208 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 PRINTS ATP synthase delta subunit signature 130 141 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 PRINTS ATP synthase delta subunit signature 208 226 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 PRINTS ATP synthase delta subunit signature 141 155 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 Pfam ATP synthase delta (OSCP) subunit 62 232 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 NCBIfam ATP synthase F1 subunit delta 63 233 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 61 162 IPR026015 -
Pte6g00922 268 PANTHER ATP SYNTHASE DELTA CHAIN 38 235 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 Hamap ATP synthase subunit delta [atpD]. 56 235 IPR000711 GO:0015986|GO:0046933
Pte6g00922 268 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 195 214 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pte6g00922 268 Gene3D - 59 153 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00922 Pte-Chr6 26430137 26433692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00922 100 242 Primary Pumps ATPases AT5G13450 64.336 3.20e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00922 K02137 - qsa:O6P43_029536 331.643