Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00913 ATGGTTCGATTCATGGAGAGGTTCAAACAGCTCCAACAAGCGCAGGAAAGGGATAAAGAGAAGACCACCAAATCAGGGGATATTAAAACAAGATTGCTTCAGGTGGTAAAACGTGCTTTCAGCTTGAAACAGAAGTCAAAACTGGTGCCACCCCCTGTGAAACTTGCAAGTGATGAGGATGAAGAAGAAGCTGTCAGTGTTGCGAATGACACAAGGGGTGCACCATCTAAAAGGAAGAAGCCTATTGCTTTAGAAACTTTGAAGAATGGTGGAAAGAGATCTGCAATGAAAGATTTGAATATGTCGCTACGCCTGCTACAAGAATTTTTGTTTGATCAAAACTGTGCCGAATACAATTATTATGAATATCAGTTAGCTCAAGAGGAGAAGGATCTTGCACAGACTAGGGAAGCCCAAACATCTCGTAACGGGAGCATGAGCTCATCATCTTCTAGATCGACAAGCAGTTCCAAGAGGTCTACCGATCTTTATTTGAGTTACCAAGTCCCTGCATCTGCTTTATATGAAGGTGTTGAACTTTCTGGTGCTGGTGGAAGTTCAGTTCAGCCACAATCTGACAACACCTATTCTGGCACCCAATCAAGCAATGATTCCTTGGCTATGATGGAGTTCTTCATGAAGAAGGCTGCACAGGAAGAGAAACGGAGACAGCCTAAGCAGTCAAAAGACGAGATGCCACCACCTCCTTCTCTTCAAGGTAAAAAGGGGCATCATATGGGAGATTATATTCCCCCAGAAGAGCTTGACAAGTTCTTGTCTACCTGCAATGATGTGGCTGCACAGAAGGCTGCTAAGGAGGCTGCAGAGAGGGCAAGAATTCAGGCTGATAATGTAGGGCACAGACTCTTGTCTAAAATGGGTTGGAAAGATGGTGAGGGTCTGGGTAGCTCCAACAAGGGTATTTCAGATCCGATCATGGCAGGTGGTGTTAAAGCCAACAATTTGGGTGTTGGCGCTCACAATCCTGGGGAGGTAACTCCTGATGACGACATATATGAGCAATACAAAAAACGTATGATGCTTGGTTATCGGTATAGACCGAACCCCTTGAACAATCCGCGTAAAGCTTACTATTAA 1098 0.4454 MVRFMERFKQLQQAQERDKEKTTKSGDIKTRLLQVVKRAFSLKQKSKLVPPPVKLASDEDEEEAVSVANDTRGAPSKRKKPIALETLKNGGKRSAMKDLNMSLRLLQEFLFDQNCAEYNYYEYQLAQEEKDLAQTREAQTSRNGSMSSSSSRSTSSSKRSTDLYLSYQVPASALYEGVELSGAGGSSVQPQSDNTYSGTQSSNDSLAMMEFFMKKAAQEEKRRQPKQSKDEMPPPPSLQGKKGHHMGDYIPPEELDKFLSTCNDVAAQKAAKEAAERARIQADNVGHRLLSKMGWKDGEGLGSSNKGISDPIMAGGVKANNLGVGAHNPGEVTPDDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00913 365 MobiDBLite consensus disorder prediction 216 247 - -
Pte6g00913 365 MobiDBLite consensus disorder prediction 49 80 - -
Pte6g00913 365 MobiDBLite consensus disorder prediction 10 27 - -
Pte6g00913 365 MobiDBLite consensus disorder prediction 133 161 - -
Pte6g00913 365 SMART G-patch_5 280 327 IPR000467 GO:0003676
Pte6g00913 365 MobiDBLite consensus disorder prediction 1 27 - -
Pte6g00913 365 MobiDBLite consensus disorder prediction 137 161 - -
Pte6g00913 365 ProSiteProfiles G-patch domain profile. 282 329 IPR000467 GO:0003676
Pte6g00913 365 MobiDBLite consensus disorder prediction 181 202 - -
Pte6g00913 365 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 109 238 IPR040169 -
Pte6g00913 365 MobiDBLite consensus disorder prediction 184 202 - -
Pte6g00913 365 Pfam G-patch domain 283 326 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00913 Pte-Chr6 25878114 25882328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00913 278 325 C2H2 Transcription Factor Family AT5G26610 50.000 1.62e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00913 K13096 - qsa:O6P43_001332 405.216