Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00898 ATGGTGGAGAAGGGCGGGAAAGCTAGAAAAGAAGAAGTTGTTACCAGAGAGTACACTATCAATCTTCACAAGCGCCTTCATGGATGCACATTCAAGAAGAAGGCTCCAAAAGCCATAAAAGAAATCAGGAAGTTTGCTCAGAAGGCCATGGCAACTACTGATGTTAGAGTAGATGTCAAGCTGAACAAGCATGTATGGAGCCGAGGAATCCGAAGTGTGCCTAGGAGGATTCGTGTACGCATTGCCCGAAAGAGGAATGATGAAGAAGATGCCAAGGAGGAGTTTTACTCATTGGTGACAGTTGCAGAAATTCCACCGGATGGTCTGAAAGGTCTGGGTACCAAGGTCATCGATGAAGAGGATTGA 366 0.459 MVEKGGKARKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMATTDVRVDVKLNKHVWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLVTVAEIPPDGLKGLGTKVIDEED* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00898 121 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte6g00898 121 FunFam 60S ribosomal protein L31 7 120 - -
Pte6g00898 121 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte6g00898 121 Gene3D - 8 121 IPR023621 -
Pte6g00898 121 PANTHER 60S RIBOSOMAL PROTEIN L31 4 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte6g00898 121 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pte6g00898 121 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
Pte6g00898 121 ProSitePatterns Ribosomal protein L31e signature. 55 69 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00898 Pte-Chr6 25424708 25426082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00898 6 122 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 82.906 3.37e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00898 K02910 - qsu:112025815 210.305