Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00895 ATGGATAAAGGAGTGCCCCCCAGTCTTTTTGTAAATGATGGTTCATTCATGGAGAGGTTCAAACAGCTCCAACAAGCGCAGGAAAGGGATAAAGAGAAGACCACCAAATCAGGGGATATTAAAACAAGTAAAATTGTTCCTGGCAGTTTGACTCCAAATCCCTCCTTGAGTAAGACAAATAATATGCAGAAAACATCCCAGATTGCTTCAGGTGGTAAACTTGCTTTCAGCTTGAAACAGAAGTCAAAACTGGTGCCACCCCCTGTGAAACTTGCAAGTGATGAGGATGAAGAAGAAGCTGCCAGTGTTGCGAATGACACAAGGGGTGCACCATCTAAAAGGAAGAAGGTGGGCCAAGCTGAAGGCTCCGAGCAATTATCAGGAGTAGTTGATGTTGCACCACCTTCCCCAAGTGATCCTACAGTAAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGACAATTTGAGGATGTTACTCGGCAAAAAAATCCAGGGGATACTCCTTTTAAATTTTTGTTTGATCAAAACTGTGCCGAATACAATTATTATGAATATCAGTTAGCTCAAGAGGAGAAGGATCTTGCACAGACTAGGGAAGCCCAAACATCTCGTAACGGGAGCATGAGCTCATCATCTTCTAGATCGACAAGCAGTTCCAAGAGGTCTACCGATCTTTATTCGAGTTACCAAGTCCCTGCATCTGCTTTATATGAAGGTGTTGAACTTTCTGGTGCTGGTGGAAGTTCAGTTCAGCCACAATCTGACAACACCTATTCTGGCACCCAATCAAGCAATGATTCCTTGGCTATGATGGAGTTCTTCATGAAGAAGGCTGCACAGGAAGAGAAACGGAGACAGCCTAAGCAGTCAAAAGACGAGATGCCACCACCTCCTTCTCTTCAAGGTAAAAAGGGGCATCATATGGGTGATTATATTCCCCCAGAAGAGCTTGACAAGTTCTTGTCTACTTGCAATGATGTGGCTGCACAGAAGGCTGCTAAGGAGGCTGCAGAGAGGGCAAGAATTCAGGCTGATAATGTAGGGCACAGACTCTTGTCTAAAATGGGTTGGAAAGAAGGTGAGGGTCTGGGTAGCTCCAACAAGGGTATTTCAGATCCAATCATGGCAGGTGGTGTTAAAGCCAACAATTTGGGTGTTGGCGCTCACAATCCTGGGGAGGTAACTCCTGATGACGACATATATGAGCAATACAAAAAACGTATGATGCTTGGTTATCGGTATAGACCGAACCCCTTGAACAATCCGCGTAAAGCTTACTATTAA 1299 0.4426 MDKGVPPSLFVNDGSFMERFKQLQQAQERDKEKTTKSGDIKTSKIVPGSLTPNPSLSKTNNMQKTSQIASGGKLAFSLKQKSKLVPPPVKLASDEDEEEAASVANDTRGAPSKRKKVGQAEGSEQLSGVVDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDQNCAEYNYYEYQLAQEEKDLAQTREAQTSRNGSMSSSSSRSTSSSKRSTDLYSSYQVPASALYEGVELSGAGGSSVQPQSDNTYSGTQSSNDSLAMMEFFMKKAAQEEKRRQPKQSKDEMPPPPSLQGKKGHHMGDYIPPEELDKFLSTCNDVAAQKAAKEAAERARIQADNVGHRLLSKMGWKEGEGLGSSNKGISDPIMAGGVKANNLGVGAHNPGEVTPDDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00895 432 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 306 432 IPR040169 -
Pte6g00895 432 MobiDBLite consensus disorder prediction 40 73 - -
Pte6g00895 432 ProSiteProfiles SURP motif repeat profile. 145 188 IPR000061 GO:0003723|GO:0006396
Pte6g00895 432 MobiDBLite consensus disorder prediction 1 142 - -
Pte6g00895 432 SMART G-patch_5 347 394 IPR000467 GO:0003676
Pte6g00895 432 Gene3D Surp module 92 200 IPR035967 GO:0003723|GO:0006396
Pte6g00895 432 MobiDBLite consensus disorder prediction 251 274 - -
Pte6g00895 432 Pfam Surp module 144 193 IPR000061 GO:0003723|GO:0006396
Pte6g00895 432 MobiDBLite consensus disorder prediction 23 39 - -
Pte6g00895 432 MobiDBLite consensus disorder prediction 198 230 - -
Pte6g00895 432 SUPERFAMILY Surp module (SWAP domain) 126 195 IPR035967 GO:0003723|GO:0006396
Pte6g00895 432 MobiDBLite consensus disorder prediction 248 316 - -
Pte6g00895 432 MobiDBLite consensus disorder prediction 204 230 - -
Pte6g00895 432 SMART surpneu2 143 197 IPR000061 GO:0003723|GO:0006396
Pte6g00895 432 MobiDBLite consensus disorder prediction 281 296 - -
Pte6g00895 432 ProSiteProfiles G-patch domain profile. 349 396 IPR000467 GO:0003676
Pte6g00895 432 Pfam G-patch domain 350 393 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00895 Pte-Chr6 25359661 25365953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00895 345 392 C2H2 Transcription Factor Family AT5G26610 50.000 1.93e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00895 K13096 - qsa:O6P43_001332 577.015