Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00887 ATGCTACTTTTGCAAGAAGAGTCTGGAGATCTTGGGCAGTGGCATTGTGGGTATCGAGGGAAGAAAAGACGTGGTTATGGTGGCAGTTGGTGGTACAGCAGTGATGACGACGATGATCGAGAGGATGAAACTGATACCCTATTCTCTTCTAGAAGTCTGTCTTCAAATTCTTCCGATTCTCGCCGGAAAAAGCAACAGAATCGCCAGAGGAGGACTGTGATTCTGAGTTCTGAGATGGGCGTTTTGCCATTACCGAGAAAAGTCAAGGATATCTTTGCAGTGGTGAAGAAGTCCAGTGATCCATACAGTGAATTTAGAACGTCAATGGTGGAGATGATTCTTGAGAAACACATATTTTCACCAAGTGGCTTGGAGAATCTCTGTTATTTGTTGCCTGTTTTTACAAGCTGA 411 0.4404 MLLLQEESGDLGQWHCGYRGKKRRGYGGSWWYSSDDDDDREDETDTLFSSRSLSSNSSDSRRKKQQNRQRRTVILSSEMGVLPLPRKVKDIFAVVKKSSDPYSEFRTSMVEMILEKHIFSPSGLENLCYLLPVFTS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00887 136 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 129 IPR038933 GO:0045892
Pte6g00887 136 MobiDBLite consensus disorder prediction 25 72 - -
Pte6g00887 136 ProSiteProfiles OVATE domain profile. 94 136 IPR006458 -
Pte6g00887 136 Pfam Transcriptional repressor, ovate 98 129 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00887 Pte-Chr6 23698962 23700490 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte6g00887 Ovate 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00887 - - cam:101496006 101.679