Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00878 ATGGCTGCCTCTCTCCTTCGCCTTCATTTCCATGATTGCTTCGTTCAGGGTTGCAATGCTTCTATATTGCTCCAAGACTCTGCCAGCATCGTCAGTGAACAAAATGCGAAGCCAAATAAGAATTCAGCGAGAGGTTACGAAGTGATAGAGAAAGCAAAGTCAGAGGTGGAGAAGATATGTCCAGGAGTTGTATCTTATGCTGATATTCTAGCGGTAGCAGCACGTGATGCCACTTTTGCAGTCGGCGGTCCATCTTGGACGGTGAAGCTCGGTCGGAGAGATTCGACCACTGCAAATATAAACAAGGCTAACAGCGATCTTCCCAAACCTTCTGATGATCTCAACATACTTATTTCCAAATTTCAAAACAAGGGATTCGATGCAGAAGAAATGGTTGCTTTGTCAGGAGCTCATACAGTAGGACAAGCTCAGTGCTTAAACTTTCGTGATCGGATATACAACAATGCAAGCACATCGATGTTGAATTTGCAAGTATTCGCAGGCAAGGTTGTCCTCTCCAAGCTTCTCCGCAAAATGACCAGCAATTAG 549 0.4481 MAASLLRLHFHDCFVQGCNASILLQDSASIVSEQNAKPNKNSARGYEVIEKAKSEVEKICPGVVSYADILAVAARDATFAVGGPSWTVKLGRRDSTTANINKANSDLPKPSDDLNILISKFQNKGFDAEEMVALSGAHTVGQAQCLNFRDRIYNNASTSMLNLQVFAGKVVLSKLLRKMTSN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00878 182 Pfam Peroxidase 1 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Pte6g00878 182 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PANTHER PEROXIDASE 72-RELATED 1 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 Gene3D Peroxidase, domain 2 108 160 - -
Pte6g00878 182 ProSiteProfiles Plant heme peroxidase family profile. 1 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 Gene3D - 1 107 - -
Pte6g00878 182 SUPERFAMILY Heme-dependent peroxidases 1 159 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte6g00878 182 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00878 Pte-Chr6 23540735 23542566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00878 1 154 Peroxidase AT5G05340 62.338 8.19e-69 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00878 K00430 - gmx:100786161 239.58