Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00874 ATGGAGAAGCCGAAACCCAACGACAACGACCTACGCACCCGCACCCGCACCCAAAACCAAAACCAAACTTGGGGTACGTGGGAAGAGCTCTTACTAGCGTGTGCTGTGAAACGACATGGTTTCAAGGATTGGGACTCCGTCGCCATGGAAGTTCAAACACGAACCTCTCTCCCTCCACTCCTCACCACCGCTCGTAACTGCGAACTTAAATTCAGCGACCTCAAACGGCGTTATACTAAACTGTCCCACTCTCACCTAAACGACAACAATGACCATCAAAACGACAACGGCTCTCTCTCTCCTGATAGCGATGATACTGTCGATCGCCTCCTTTGGCTCGACGAGCTACGTAAACTCCGCGTCGCAGAGCTTCGCCAACAAGTTCAACGCTCCGACGTCTCCATTCTGTCGCTACAGTTAAAAGTGAAGAGGCTGGAGGAAGAGAGAGAAAGAAGCTTGAAGGAGGAACAAGAAAGTGGTGGAAATAATAAACCAGATCTAGAAGTTTCAGCAGGATGTAGATCAGAAAATAACGAAAAACCAGGTAAGGAATTGAATTCTATCGAACTGGTTAGGAGCGACGGTGGCAAGCGGGTTCGTGGTGATGAATCGGACCGGGATAACCAGTCGGTTAACGAGTCTAATTCAACTGGTTCTAGATCCGAGAATGGAGAAATCGGCAAAGTGGTGAGGGAGGTCAAGTTGGAACCGGAGGTAGTCAGAGATGATAACCGAGAACCGGTCACTCGAGGTGATAAGCCGGTTGGCGGAGAATACAGGGAGGGTGAGTCAGTACAACCGAGTGAAGGAAACAAAGTGGAGGACTCGTCGGAGTTAAGAGACTTGAGTGCGGATGGTGAATTGTTTTTGATGAAGGATAGTAGTGAGGTGCAAAGCTCAGCTACTCTAACCAGAAAAAGGAATAAAAGACGGAGGACAGAGCTCTCCGGTGGTACCAGTGGGGAAGATCAGCCGGAGAATGAGGAGGCCTCTGTGAAATCACAACCGTTGGCTGGGGTTTTGGAGATGATCAAAGGCCAAGAACATAGCTCATTGTTTGAACGCCTTATCGAAAATCAGGAATCTGAAAAGTACAAGAAGTTAGTGCGACAACACCTTGACTTGGAAAAAATACAGTTGAAACTTCGTGAAGGTTACTATTCATCTTGTGGCTTAGCACTGTTTCGAGACTTGCTACTTCTCTTCAACAACGCCGTGGTTTTCTTCCCCGAAGACTCAGTTGAATCAACCGCTGCTCACCAACTAAGGCGTATTGTCTCTAACGAAATTAAGGCCCATATTCAAAACCCACCACCTAAATCACCTCAACACAAACATCACTCGTTTGAAAGATCAGAATCTGATGCTTCCAAACACAATTCGTCTGCACCTATATTGGTCTGTAGGAAACGAAGTTCAATCGCATCCAAGGCTTCTTCCGGCAGCGGTGGTCAGCAAAGTGATGACAGTAAGAAGCTATGTTCCGACAGAAAGCCTCCCATCAAGTCCTCGTCATCGGAAGCAGTAGAAGAGGCTCCTACTGTGGACACCAAACCCAAAGAGAAGCCTAAGACGGGAGTTAGAAGCTTTAGAAGAAGCACCAAGAATCTTATTAATAATGTAAATAGTAATTCAAGCAAGAAGCCGATGGTCAACAGTACTGGTTCAAAACCTGGTTCAGCCAACAAGTCTACAGAGACTATCACTAAAGTTGCCGACGAACAGAAATTGCAGTCTACGACCTCAACAGAGAAGAAGCGAAGTGCTGCAGATTTTTTGAAGAGAATTAAGCGGAACTATCCTGCTGAGACATTGAAAATAACCGGTGGTGCTGGCAGCAGTGGTGTAGGTGGAAGAAATAGCAAAACTACTAGTAACAGCGGTAAGAGCAGAAGAAAACGAATGGTAATGGCAAAAATGATAGAGGCAGTAAGGAGAGAATATTGA 1947 0.4648 MEKPKPNDNDLRTRTRTQNQNQTWGTWEELLLACAVKRHGFKDWDSVAMEVQTRTSLPPLLTTARNCELKFSDLKRRYTKLSHSHLNDNNDHQNDNGSLSPDSDDTVDRLLWLDELRKLRVAELRQQVQRSDVSILSLQLKVKRLEEERERSLKEEQESGGNNKPDLEVSAGCRSENNEKPGKELNSIELVRSDGGKRVRGDESDRDNQSVNESNSTGSRSENGEIGKVVREVKLEPEVVRDDNREPVTRGDKPVGGEYREGESVQPSEGNKVEDSSELRDLSADGELFLMKDSSEVQSSATLTRKRNKRRRTELSGGTSGEDQPENEEASVKSQPLAGVLEMIKGQEHSSLFERLIENQESEKYKKLVRQHLDLEKIQLKLREGYYSSCGLALFRDLLLLFNNAVVFFPEDSVESTAAHQLRRIVSNEIKAHIQNPPPKSPQHKHHSFERSESDASKHNSSAPILVCRKRSSIASKASSGSGGQQSDDSKKLCSDRKPPIKSSSSEAVEEAPTVDTKPKEKPKTGVRSFRRSTKNLINNVNSNSSKKPMVNSTGSKPGSANKSTETITKVADEQKLQSTTSTEKKRSAADFLKRIKRNYPAETLKITGGAGSSGVGGRNSKTTSNSGKSRRKRMVMAKMIEAVRREY* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00874 648 MobiDBLite consensus disorder prediction 151 333 - -
Pte6g00874 648 MobiDBLite consensus disorder prediction 604 635 - -
Pte6g00874 648 CDD Bromodomain 340 430 - -
Pte6g00874 648 SMART sant 20 77 IPR001005 -
Pte6g00874 648 SUPERFAMILY Bromodomain 334 436 IPR036427 GO:0005515
Pte6g00874 648 MobiDBLite consensus disorder prediction 443 457 - -
Pte6g00874 648 SMART bromo_6 330 435 IPR001487 GO:0005515
Pte6g00874 648 Pfam Myb-like DNA-binding domain 22 56 IPR001005 -
Pte6g00874 648 Gene3D - 324 436 IPR036427 GO:0005515
Pte6g00874 648 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 16 623 - -
Pte6g00874 648 MobiDBLite consensus disorder prediction 84 104 - -
Pte6g00874 648 MobiDBLite consensus disorder prediction 513 528 - -
Pte6g00874 648 MobiDBLite consensus disorder prediction 433 588 - -
Pte6g00874 648 SUPERFAMILY Homeodomain-like 19 56 IPR009057 -
Pte6g00874 648 MobiDBLite consensus disorder prediction 473 489 - -
Pte6g00874 648 ProSiteProfiles Bromodomain profile. 345 416 IPR001487 GO:0005515
Pte6g00874 648 Coils Coil 135 155 - -
Pte6g00874 648 CDD SANT 23 81 IPR001005 -
Pte6g00874 648 Pfam Bromodomain 340 419 IPR001487 GO:0005515
Pte6g00874 648 MobiDBLite consensus disorder prediction 530 586 - -
Pte6g00874 648 MobiDBLite consensus disorder prediction 225 287 - -
Pte6g00874 648 MobiDBLite consensus disorder prediction 177 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00874 Pte-Chr6 23334987 23339955 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte6g00874 Bromodomain 2.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00874 - - qsa:O6P43_029480 536.954