Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00873 ATGGAGCTCGGTTTAAGCTTAGCTGAAACTCCAAAGAATTTTATGATGGTGACGAACCCTTCTCATGCAGCCTCCACAACCTTATCAATTGATCTAGTTGGTGGACAGGTGAAAAAACCTGAAGAAGCCACCCATCATCACCAGAAGCCACGCCATACCCAAGGAGGCCGGGTTAGCAATCAGTACGCTAATGGTTTATCTCCAAAATCCAATCAGTTCCCTCCCCAGCTTAATCTTCTTCCTCGCACACTACTGTTCCTTCCTGGTGGTTACAATCCACCTTCATCTGGAAACGGGAGTTCAGGTGAGGCAGGTTTCTCAAAAAGATTCAATGTGAATAGGCTGCCAAGGGCTGATGATCAAGAAGGAGGAGAAGAAGTACCTGCAGTGTTCTCATCTCCAAACAACAGTGCCGCCTCTTCCTTTCAGATTGATTTGTGTAGTATATATGGCAAAGGGCTGAACCAATATGGCAAGAGGGATTCGGATGGTGAGGGTTGTGATCAAAGGGCCTCTTCCAGAGCTAGTGATGAGGATGATAACAGTAGTGGTAACCGGAAGAAGCTCAGACTTTCTAAAGAACAGTCTGCTTTTCTTGAAGGAAGAACGAAGTTGAAGCAGACAGAGATTGACTGTGAATACATGAAGAGATATTGTGAGACACTGATTGAAGAGAACAAAAGACTTCACAAAGAGCTTCAGGAATTAAAAGCTTCGAAGACTTCAAATCCATTCCTCTTGTGA 744 0.4449 MELGLSLAETPKNFMMVTNPSHAASTTLSIDLVGGQVKKPEEATHHHQKPRHTQGGRVSNQYANGLSPKSNQFPPQLNLLPRTLLFLPGGYNPPSSGNGSSGEAGFSKRFNVNRLPRADDQEGGEEVPAVFSSPNNSAASSFQIDLCSIYGKGLNQYGKRDSDGEGCDQRASSRASDEDDNSSGNRKKLRLSKEQSAFLEGRTKLKQTEIDCEYMKRYCETLIEENKRLHKELQELKASKTSNPFLL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00873 247 MobiDBLite consensus disorder prediction 118 137 - -
Pte6g00873 247 SMART halz 206 247 IPR003106 GO:0006355|GO:0043565
Pte6g00873 247 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 202 245 - -
Pte6g00873 247 MobiDBLite consensus disorder prediction 38 75 - -
Pte6g00873 247 MobiDBLite consensus disorder prediction 158 191 - -
Pte6g00873 247 MobiDBLite consensus disorder prediction 54 75 - -
Pte6g00873 247 Pfam Homeobox associated leucine zipper 206 239 IPR003106 GO:0006355|GO:0043565
Pte6g00873 247 Coils Coil 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00873 Pte-Chr6 23296415 23297654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00873 171 247 Homeobox Transcription Factor Family AT4G37790 42.609 1.95e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00873 K09338 - qsa:O6P43_029477 191.045