Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00862 ATGCCTGACTTGATCACCAGGATAGACAAAGCAAGCAACTGCAGGATGATTGAAGCAAAGGCTGAGATAATCTCAAAGACTTGCATTAAACCTTCAACTCCAACACCCCGCCATCTCAAGACCAAAAAAATTTCTCTTCTTGATCAACTTTCCCCTAATCTCCATAATGTCATGACTATTTTCTACCATAATAGTATCACTGATTCCCATGATAACTGCATGTCAACGTTCTCAACAAGATCACAACTCCTTCAAAACTCACTCTCTGAAACCCTCTCTCTCTTCTACCCTCTTGCTGGCAGATTCAAAGATGATGCTACTATTGTTTGCGACGATGTTGGTGTTGCCTTCATTGAAGCAAAAACTGAGATCAGTCTCTCAGATATCCTCACTCACCCTGACCTAGACGCTATAGGTTCTCATTTCTTTTTACTTACGGATGAATTGAAAGTCATGAAAGAACTGCAACGCCCTTTGCTGCTCGTTGGTTTCACCTTGTTTACTTGTGGAAGCACTGCTTTGAGCATTTGTATAACGCACAAGATTGCTGACTTAGCCTCGGTAGTGACACTGGTCCAGAGCTGGACTGCTGCATGTCGAGACACCAAGCCGGTAGTAGTACCGGAGTTGAACATAGCAGCTTCCCTCTTGCCACCACGACAGATCCCTGACATATCAGAATCTGTTGTGATCAGTTCAAGGAAGATAGCTTCGATCAGGCTTGTTTTCACAGCTTCCAAGGTAGGAGAGTTGAAGTCCAAGGTGTTAAGTCAATTTGGGAAAGAGTACTTGAAGCACTATCCTACACGAGCCGATGTTGTCTTGGCGCTTATATGGAAATGTGCTATGAACGCTATGAAATCTAAAACGGGGAAGTTTAAGGAAACCGTTTTATTACAAGCGGTGAACCTAAGAAACAGAATGGACCCACCACTGCCACAAAATTCAATGGGAAATTTGGCTTGGCTATTTCCATTGGTTGTTGAGAAGGAGAGTGAAATGGAAATACATGAACTGGTGAAGAAGATGATAGGCATGAAATCATCTCTTAAGAACAAGGTGACCAAATTTAGCAGTGAAGAAATTGTTGCAACAGTGAAAGAGGGGCTGCATGAAAGGCAACGACTTCTTATGAATGAGAAAGATCTTGCTGTGTATCTCTGTGCTAGTTGGTGCAAGTTTCCGATGCTTGAATTTGATTTTGGATGGGGAAAGCCAGTGTGGGTGACTAGCATTGATAAAGGTAATCTGATGGGGAATACCATACATTTGGCCGATACAAGAGTTGCAGGTGAAGTTGAGGCATTGGTGCATCTAGATGAAGAGGAGACGAGTATATTTATACATAATGATGAGCTGCTTAAGTATGCATTGATTAACCCTAGTATTATTTGA 1395 0.4222 MPDLITRIDKASNCRMIEAKAEIISKTCIKPSTPTPRHLKTKKISLLDQLSPNLHNVMTIFYHNSITDSHDNCMSTFSTRSQLLQNSLSETLSLFYPLAGRFKDDATIVCDDVGVAFIEAKTEISLSDILTHPDLDAIGSHFFLLTDELKVMKELQRPLLLVGFTLFTCGSTALSICITHKIADLASVVTLVQSWTAACRDTKPVVVPELNIAASLLPPRQIPDISESVVISSRKIASIRLVFTASKVGELKSKVLSQFGKEYLKHYPTRADVVLALIWKCAMNAMKSKTGKFKETVLLQAVNLRNRMDPPLPQNSMGNLAWLFPLVVEKESEMEIHELVKKMIGMKSSLKNKVTKFSSEEIVATVKEGLHERQRLLMNEKDLAVYLCASWCKFPMLEFDFGWGKPVWVTSIDKGNLMGNTIHLADTRVAGEVEALVHLDEEETSIFIHNDELLKYALINPSII* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00862 464 Gene3D - 18 228 IPR023213 -
Pte6g00862 464 PANTHER F21J9.9 22 457 - -
Pte6g00862 464 Gene3D - 234 455 IPR023213 -
Pte6g00862 464 Pfam Transferase family 20 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00862 Pte-Chr6 22931295 22932823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00862 20 409 Monolignol Biosynthesis Gene Families AT5G48930 23.148 9.87e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00862 - - qsa:O6P43_014533 474.167