Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00861 ATGGGGACTCCAGTTAATATCATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCATGGATTGATGGTGAAGTAATTCAAATAAATGGCACCCAGGCTACCATAGTAACAACAAATGAGAGGACAGTGGTGGCAGACATTTCCAGTATATATCCCAAGGACACAGAAGCTCCAGCTGCAGGAGTTGATGACATGACCAAATTAGCATACCTTCATGAACCGGGAGTTCTATATAATCTTTCCTGTCGGTTTGGTCTAAATGAGATATATACATACACAGGCAACATTTTGATAGCAGTTAATCCTTTCCGGAGACTGCCACATTTATATGACATTCACATGATGGAGCAGTACAAAGGAGCTGCTTTTGGTGAGCTAAGTCCGCATCTTTTTGCTGTTGCGGACACTTGTTACAGGGCAATGATAAATGGACATGGAAGTCAATCTATATTGGTAAGTGGCGAGAGTGGAGCAGGTAAAACGGAGACAACAAAAATGCTCATGAGATATCTTGCTTTTATGGGGGGCAGATCAAATACTGAAGGAAGAACAGTAGAGCAACAGGTTTTGGAGTCCAATCCAGTTTTAGAAGCATTCGGGAATGCTAAAACTGTGAAGAACAACAATTCAAGTCGTTTTGGCAAATTCGTTGAGCTTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCTGTTCGTACATATCTTCTTGAAAGATCACGTGTTTGCCAAATATCAGAGCCTGAGAGAAACTACCATTGTTTCTACATGCTTTGTTCAGCACCTGAAGAGGATGTGAAAAGATTCAAGCTAGGAGATCCAAAGTCATTTCATTATCTAAATCAATCACCCTGCTACGAAGTTGCAAATGTAGATGATGCAAAAGAGTACTTGGAGACAAGAAATGCAATGGACATTGTAGGCATCAGCCAGGATGAGCAGGATGCAATCTTTCGAGTTGTTGCAGGAATCCTTCATCTTGGAAATGTTGACTTCATCAAGGGAAACGAAGCTGATTCTTCTAAGTTGAAAGATGACAAATCACGATATCACCTACAAACAGCAGCAGAAATGTGGATGTGTGATGAGAAAGCACTTGAAGACTCCCTTTGCAAGAGAGTCATAGTTACTCCGGATGGTAAAATAACAAAACCACTGGATCCTGGTCAGGCTGCAATTAGCCGTGATGGTTTGGCCAAAACTGTGTACTCCAGGCTGTTTGATTGGATTGTGGATAAGATAAACAACTCAATTGGTCAAGATCCCAATGCTGTATACTTAATTGGAGTTCTCGACATTTACGGCTTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTGACGAATGAGAAATTGCAACAACATTTCAATCAGCATGTGTTCAAGATGGAGCAAGAAGATTATACAAAGGAGGAAATAGACTGGAGTTACGTAGAATTTGTTGATAACCAAGATGTACTTGATCTGATCGAAAAGAAACCTGGGGGAATAATAGCTCTTCTAGATGAAGCCTGCATGTTCCCAAAGTCAACCCATGAGACATTTGCACAGAAGATGTATCAGACATACAAGGGACACAAGCGTTTCAGCAAGCCAAAACTGGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATGTCACATACCAGGCAGATCAATTTCTGGATAAGAATAAGGACTACGTCGTAGCAGAACATCAAGCTCTATTAAACGATTCTAAGTGTTTCTTTGTTTCTAATCTTTTCCCTCCACTTCCTGAAGAGACATCTAAGCAATCAAAGTTCTCTTCTATTGGTTCACGCTTCAAGCAACAACTGCAAGCCTTGATGGAAACTTTGAACACTACAGAACCACATTACATCAGATGTGTAAAGCCCAATACTGTTTTGAAGCCTGGAATTTTTGAAAACTACAATGTATTGAACCAGTTACGATGCGGGGGTGTGCTTGAGGCTATTAGGATTAGCTGTGCAGGATATCCAACAAAAAGGACATTTGATGAGTTCCTTGACCGCTTTGGAATGCTTGCACCTGACGTCCTGGATGGATCAGACGAGAAAACAGCATGCATTGCCATCTGTGATAAAATGGGTTTGAAAGGATACCAGATAGGTAAAACAAAAGTGTTCCTAAGAGCTGGTCAGATGGCCGAACTAGACGCAAGAAGGACAGAAGTATTGGCTGGTGCAGCTAGACTGATACAGAGGCAAATTAGAACTCACTTGACCAGAAGAGAATTCATTACCCTTCGGAAGGCAACCATTCAAATGCAGAAACTGTGGAGAGCATGGCTTGCACGCAAACTTTACGAGTATTTGAGAAGGGAAGCAGCTTCAGTCCATATTCAGAAACATGCACGTGCTCACAAGGCAAGAATAGAATACACAGTGATCCAATCATCCACAATTGTCATTCAAACTGGCATGCGTGCAATGGTTGCCAGGAATGATTACAGTTTCAGACGAAGAACAAAGGCTGCAATCAAAATTCAAACCGAATGGAGAATGTTCCAAGCTCTTAATGCATACAAAAAATTGAAGTGGTCAACAGTAAGACTCCAATGTCTCTGGAGAGCAAAAGTGGCGAGGAAGGAGCTCAGAAAGCTCAAAATGGCTGCAAGAGAAACCGGAGCACTTAAAGAAGCAAAGGACAAGTTAGAGAAGCGCGTCGAAGAGCTTACATGGCGACTAGAACTTGAAAAGCACCAGAGGATTGACCTTGAAGAAGCGAAGGCACAAGAAATTGCAAAACTGGAAAATACTTTACATGAAATGCAAATTCAGCTAGATGAAGCTCATGCTGCAATTATAAAAGAGAAAGAAGCGGCAAAGCTTGCAATTGAACAAGCACCACCAGTCATTAAAGAGGTTCCGATTATGGACAATACCAAGCTAGAGATTTTGACAAGTCAAAACAGTGACCTAGTGGAGGAAGTAAATGAGTTGAGGAAGAAGATTCAGGACTTTGAGGAGAAATATTTAGCAGTCGAAGAGGAGAATAAAGCAAGAATGAAGGAGGCAGACGAAGCACAAGAAAAAGCGATACAACTTCAAGAGACAATTGAAAGATTAGAATCAAATTTGTCCAACCTTGAATCTGAGAATCAGGTTCTGCGCCAACAGGCTTTGGTTGAATCATCGAACGAAGAACTCTCTGAAGAGTTGAAAACACTCAAGAATACGCTAGAACTTCTTGAAGCAGAGAATGAAAATCTTCGTAAGCAAGCAAAAGAAGTGGGACAGAAAGCTGTGCAGCAAAATAGCACTCCAGAAGTGAAGGTACAATATTTAACGCGTCCTTCACTTATATGCTGA 3336 0.4125 MGTPVNIIVGSHVWVEDPEDAWIDGEVIQINGTQATIVTTNERTVVADISSIYPKDTEAPAAGVDDMTKLAYLHEPGVLYNLSCRFGLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINGHGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVELQFDKNGKISGAAVRTYLLERSRVCQISEPERNYHCFYMLCSAPEEDVKRFKLGDPKSFHYLNQSPCYEVANVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAGILHLGNVDFIKGNEADSSKLKDDKSRYHLQTAAEMWMCDEKALEDSLCKRVIVTPDGKITKPLDPGQAAISRDGLAKTVYSRLFDWIVDKINNSIGQDPNAVYLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEDYTKEEIDWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNDSKCFFVSNLFPPLPEETSKQSKFSSIGSRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENYNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDVLDGSDEKTACIAICDKMGLKGYQIGKTKVFLRAGQMAELDARRTEVLAGAARLIQRQIRTHLTRREFITLRKATIQMQKLWRAWLARKLYEYLRREAASVHIQKHARAHKARIEYTVIQSSTIVIQTGMRAMVARNDYSFRRRTKAAIKIQTEWRMFQALNAYKKLKWSTVRLQCLWRAKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLELEKHQRIDLEEAKAQEIAKLENTLHEMQIQLDEAHAAIIKEKEAAKLAIEQAPPVIKEVPIMDNTKLEILTSQNSDLVEEVNELRKKIQDFEEKYLAVEEENKARMKEADEAQEKAIQLQETIERLESNLSNLESENQVLRQQALVESSNEELSEELKTLKNTLELLEAENENLRKQAKEVGQKAVQQNSTPEVKVQYLTRPSLIC* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00861 1111 Coils Coil 876 910 - -
Pte6g00861 1111 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 Coils Coil 972 1089 - -
Pte6g00861 1111 Gene3D Kinesin motor domain 65 662 IPR036961 -
Pte6g00861 1111 FunFam unconventional myosin-Va 833 880 - -
Pte6g00861 1111 FunFam unconventional myosin-Va 784 832 - -
Pte6g00861 1111 Pfam Myosin N-terminal SH3-like domain 9 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 FunFam Class V myosin 439 582 - -
Pte6g00861 1111 Coils Coil 915 942 - -
Pte6g00861 1111 Gene3D - 733 783 - -
Pte6g00861 1111 Gene3D - 833 881 - -
Pte6g00861 1111 Gene3D - 784 832 - -
Pte6g00861 1111 ProSiteProfiles IQ motif profile. 734 763 IPR000048 GO:0005515
Pte6g00861 1111 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Pte6g00861 1111 Gene3D - 667 729 - -
Pte6g00861 1111 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Pte6g00861 1111 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 Gene3D - 252 310 - -
Pte6g00861 1111 ProSiteProfiles IQ motif profile. 782 809 IPR000048 GO:0005515
Pte6g00861 1111 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 SMART iq_5 829 851 IPR000048 GO:0005515
Pte6g00861 1111 SMART iq_5 852 874 IPR000048 GO:0005515
Pte6g00861 1111 SMART iq_5 804 826 IPR000048 GO:0005515
Pte6g00861 1111 SMART iq_5 733 755 IPR000048 GO:0005515
Pte6g00861 1111 SMART iq_5 781 803 IPR000048 GO:0005515
Pte6g00861 1111 SMART iq_5 756 778 IPR000048 GO:0005515
Pte6g00861 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 785 IPR027417 -
Pte6g00861 1111 FunFam Myosin heavy chain 252 307 - -
Pte6g00861 1111 PANTHER MYOSIN 54 1062 - -
Pte6g00861 1111 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Pte6g00861 1111 FunFam Myosin XI D 667 729 - -
Pte6g00861 1111 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte6g00861 1111 Gene3D - 439 623 - -
Pte6g00861 1111 CDD MYSc_Myo11 76 719 IPR036018 -
Pte6g00861 1111 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Pte6g00861 1111 Pfam IQ calmodulin-binding motif 737 754 IPR000048 GO:0005515
Pte6g00861 1111 Pfam IQ calmodulin-binding motif 855 874 IPR000048 GO:0005515
Pte6g00861 1111 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Pte6g00861 1111 Pfam IQ calmodulin-binding motif 831 851 IPR000048 GO:0005515
Pte6g00861 1111 ProSiteProfiles IQ motif profile. 830 854 IPR000048 GO:0005515
Pte6g00861 1111 FunFam Myosin 2 312 427 - -
Pte6g00861 1111 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Pte6g00861 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 882 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00861 Pte-Chr6 22912808 22919955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00861 116 1082 Myosins gene family AT2G31900 80.558 0.0 1634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00861 K10357 - zju:107425241 1832.38