Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00852 ATGCCTCCAATTCCAAATTCTGAAGCACCATCCACCGCAGGGTCTACCAAGGCAGTACCTACACCTGGTAGGCCTTATGATGCAAAGAGCATAGGTGCAGCTTCCTGTCATGGTTATAGGAGTGGAGGTAGCTCACCCAGCTCAGATACCATATGCAGCAGCACTCCGCTCAGGCCTCATACAGGTGGGGATCTAAGGTGGGATGCCATTAACATAGTTTCAAAGGGGAGTCTTCTAGATCTACGCCATTTTCGCCTATTAAAACGCCTTGGACATGGGGATATTGGAAGTGTCTATCTTGTGGAACTTAGAGGAACTAAAACCTACTTCGCCATGAAAGTCATGGACAAGGCATCACTTGCAAGCAGAAATAAACTACTTAGAGCACAAACAGAAAGAGAGATTCTCAGCCTTCTTGACCATCCATTCTTGCCAACTTTATATTCTTACTTTGAAACTGATAAGTTTTATTGCTTGGTCATGGAGTTCTGTAGTGGAGGTAATCTTCACTCCCTTAGACAGAAGCAGCCCAACAAGTATTTTACAGAAGCAGCAGCAAGGTTTTATGCTTCAGAGGTTCTATTAGCTCTTGAGTATCTGCATATGCTAGGAATTGTCTACAGAGACCTGAAGCCAGAGAATGTGTTGGTCAGAGAAGAAGGCCACATTATGCTCTCAGACTTTGATCTTTCTCTTCGTTGCTCAGTCAGTCCTACCCTCGTCAAGTCCTCATCAGTCCATGCCAGCAATGGTGGCAGTCTTGCTTCTGCAGTCGTTTTGAGTGATGAAAATGCAGTACAGGGCTGTATGCAGCCATCGTCATTCTTCCCACGCATTTTACCCTCAAAGAAAAACCGAAAGTCAAAATCTGATTTCGGACTATTTGTCGGAGGCTCCCTCCCTGAACTGATGGCTGAGCCGACAAATGTGCGATCCATGTCGTTTGTCGGAACACATGAATATCTAGCTCCAGAAATTATCCGCGGTGAGGGGCATGGTAGTGCAGTTGATTGGTGGACTCTTGGTATCTTCTTATATGAGCTCTTGCATGGAATCACTCCTTTTAAAGGTGCAGGAAATCGTGCCACACTTTTCAACGTTGTAGGTCAGCCATTGAAGTTTCCTGAATTTCCTCAAGTTAGTGCAACAGCTCGTGATCTCATTCGGGGTCTTTTGGTGAAGGAGCCGCAGAAAAGATATGCCTACAAAAGGGGTGCGACTGAAATAAAACAACATCCATTTTTTGAAGGAGTGAACTGGGCGCTAGTAAGAAGTGCCACCCCTCCACATATACCTGATCCTGTAAATTTTTCACAGTATGGTGGCAAAGAGTCAGCTTCTACAGACAAGAAGATGGCTGAGGTTGCAGCTGAAAAAAACAGCAGTAGTAACAATGATTCTACTTATGCTAATTTTGAGTATTTTTAA 1428 0.4454 MPPIPNSEAPSTAGSTKAVPTPGRPYDAKSIGAASCHGYRSGGSSPSSDTICSSTPLRPHTGGDLRWDAINIVSKGSLLDLRHFRLLKRLGHGDIGSVYLVELRGTKTYFAMKVMDKASLASRNKLLRAQTEREILSLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEAAARFYASEVLLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSVHASNGGSLASAVVLSDENAVQGCMQPSSFFPRILPSKKNRKSKSDFGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTLGIFLYELLHGITPFKGAGNRATLFNVVGQPLKFPEFPQVSATARDLIRGLLVKEPQKRYAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDPVNFSQYGGKESASTDKKMAEVAAEKNSSSNNDSTYANFEYF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00852 475 FunFam Serine/threonine-protein kinase AGC1-7 308 433 - -
Pte6g00852 475 PANTHER FLIPPASE KINASE 1-RELATED 47 440 - -
Pte6g00852 475 Gene3D Phosphorylase Kinase; domain 1 82 167 - -
Pte6g00852 475 SUPERFAMILY Protein kinase-like (PK-like) 82 442 IPR011009 -
Pte6g00852 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pte6g00852 475 FunFam serine/threonine-protein kinase D6PK-like 168 235 - -
Pte6g00852 475 FunFam Serine/threonine-protein kinase D6PK-like 82 167 - -
Pte6g00852 475 Pfam Protein kinase domain 309 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00852 475 Pfam Protein kinase domain 85 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00852 475 Gene3D Transferase(Phosphotransferase) domain 1 308 433 - -
Pte6g00852 475 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte6g00852 475 ProSiteProfiles Protein kinase domain profile. 84 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00852 475 MobiDBLite consensus disorder prediction 437 467 - -
Pte6g00852 475 Gene3D Transferase(Phosphotransferase) domain 1 168 239 - -
Pte6g00852 475 CDD STKc_phototropin_like 82 434 - -
Pte6g00852 475 SMART serkin_6 84 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00852 475 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00852 Pte-Chr6 22233654 22235201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00852 53 476 AGC Kinase Gene Family AT1G79250 76.734 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte6g00852 Pkinase 4.2e-38 CL0016