Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00840 ATGGCAGCTCTTGCAGCTTCACTAAGATTGAATACCAGACTGGCGGTTTGGTCCCGCAACCTCATGTCTCGTTACACTCCTTCAAAGTTGCAATCCATGCAAACCAGCACTCCTCCCGTTTGTCAGTTAAGTACCGATGCCCACAGTATCGCTCATCAGCTTAATAGTGCTGGCCTACTGCGAAGTCAGGGCCTCATTGGAGGGAAATGGACGGATGCATATGATGGGAAGACCATAAAGGTCTATAATCCTGCAACTGGCGAATCTATAACAGATCTCGCATGCATGGGTCAAAAAGAAACAAATGATGCGATAGCGTCGGCATATGATGCCTTTCAATCTTGGAGCAAGACCACTGCAGCTGAGAGAAGCAAACTTTTAAGGAAATGGTATGGTTTACTAATGGTCCGCAAAGAAGAGCTTGCACAACTTATGACCTTGGAGCAGGGGAAACCATTAAAAGAAGCCATGGGTGAGGTTAATTATGGGGCTGGTTTTATAGAGTTCTTTGCAGAGGAGGCAAAACGAGTATATGGTGAAATAATTCCATCACCTCTATCTGATCGTCGATTGGTTGTTTTAAAACAGCCTGTTGGTGTTGTGGCTGCTATTACACCTTGGAACTTTCCTCTGGCTATGATTACCAGAAAGGTTGGCCCTGCCCTTGCATGTGGTTGTACTGTGGTAGTAAAACCTTCTGAATTTACTCCTCTAACAGCTTTAGCTGCAGCTGAACTAGCCCTTCAAGCAGGAATACCGCCGGGCGTAATAAATGTGGTCATGGGCAATGCTCCTGATATTGGAGAAGCTTTACTTGCAAGCTCGCAGGTAAGAAAAATCACATTCACAGGCTCTACGGCAGTTGGCAAGAAGTTGATGGAAGGTGCTGCTAAGACAGTTAAAAAGGTGTCTCTCGAACTTGGGGGCAATGCACCATGCATAATTTTTGATGATGCAGACTTGGATGTGGCAATAAAAGGAACAATGGCAGCAAAGTACCGCAATAGTGGACAAACATGTATCAGTGCAAATAGAATTCTTGTACAAGAAGGTATATATGGAAAATTTGCAAGTGCTCTTCTAGAAGCTGTTCAAAGTTTGAAAGTTGGGGACGGATTTAGTGAAGGTGTATCTCAGGGTCCCTTAATCAATGAGGCTGCCGTCGAAAAGGTTGAATCCTTACTTAGTGATGCTACCTCAAAGGGAGCAAAAATACTTATGGGGGGAAAAAGGCATAGCCTCGGACTTGCATTCTTTGAACCTACAGTTATTACTGATATCAAAAGTGATATGCGCATATCAAGAGAGGAAGTTTTTGGACCTGTTACACCCCTTGTACGCTTCAAAACTGAGGAGGAGGCCATCCAAATGGCTAATGATACTAATGCAGGATTGGGTTCTTACATATTTACAACCAATGTTCAACGTTCATGGCGAGTTGCTGAAGCTCTTGAATACGGGCTAGTGGGTGTTAATGAGGGTCTAATCTCAACAGAGGTGGCTCCCTTTGGTGGTTTTAAGCAATCTGGCCTTGGACGTGAAGGCTCAAAATACGGGATTGATGAATATGTTGAGATCAAATACGTTTGTTTCGGAGATATGGATAGAAAATGA 1614 0.4393 MAALAASLRLNTRLAVWSRNLMSRYTPSKLQSMQTSTPPVCQLSTDAHSIAHQLNSAGLLRSQGLIGGKWTDAYDGKTIKVYNPATGESITDLACMGQKETNDAIASAYDAFQSWSKTTAAERSKLLRKWYGLLMVRKEELAQLMTLEQGKPLKEAMGEVNYGAGFIEFFAEEAKRVYGEIIPSPLSDRRLVVLKQPVGVVAAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVINVVMGNAPDIGEALLASSQVRKITFTGSTAVGKKLMEGAAKTVKKVSLELGGNAPCIIFDDADLDVAIKGTMAAKYRNSGQTCISANRILVQEGIYGKFASALLEAVQSLKVGDGFSEGVSQGPLINEAAVEKVESLLSDATSKGAKILMGGKRHSLGLAFFEPTVITDIKSDMRISREEVFGPVTPLVRFKTEEEAIQMANDTNAGLGSYIFTTNVQRSWRVAEALEYGLVGVNEGLISTEVAPFGGFKQSGLGREGSKYGIDEYVEIKYVCFGDMDRK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00840 537 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Pte6g00840 537 CDD ALDH_F5_SSADH_GabD 81 531 - -
Pte6g00840 537 FunFam Succinate-semialdehyde dehydrogenase I 309 498 - -
Pte6g00840 537 Pfam Aldehyde dehydrogenase family 70 529 IPR015590 GO:0016491
Pte6g00840 537 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 56 533 - -
Pte6g00840 537 FunFam Aldehyde dehydrogenase, putative 501 527 - -
Pte6g00840 537 SUPERFAMILY ALDH-like 59 534 IPR016161 GO:0016491
Pte6g00840 537 FunFam Succinate-semialdehyde dehydrogenase I 76 319 - -
Pte6g00840 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 309 498 IPR016163 GO:0016620
Pte6g00840 537 NCBIfam succinate-semialdehyde dehydrogenase 81 527 IPR010102 GO:0009013|GO:0009450
Pte6g00840 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 523 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00840 Pte-Chr6 21085028 21106330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00840 19 538 Aldehyde Dehydrogenase Gene Family AT1G79440 75.577 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00840 K17761 - gmx:100793318 844.728