Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00829 ATGTCTACGCACACACGGCGCCCTCTTCCCTTTGTTTTCTTCATTCTCTCAGCCACTTCCCTCTTTCTCCATCCAATCCCAACCGTTGCTTACCTTGACCCAACTGATTCCGACGCCACAGATTTCATCCGTACAAACTGCAACACAACTCTCTACCCTGACCTTTGCTACACCTCTCTCTCTCGCTATGCCAGTGCCATCCAACAAAGCAACGGTCAGCTTGCACGAGTCGCCATTGGAGTGAGTCTAATCAAAGCTCGTCACATGGCTGCGTACATATCAAACATGACTCGTGAAGCTGAGTATGGTCTCGACTCCAGAGCTGTCTCTGCCCTCCATGACTGCTCCAGCAACCTGGGTGATGCAGTGGATGAAATCCATGGGTCGTTGAAACAGATGCGCCAGCTGGGTGCTGCTGGTAGCGGGACTGAATCTTTTAGGTTTCAGATGAGCAATGTGCAGACATGGATGAGTGCTGCTTTGACAGATGAAGAAACTTGCACGGACGGTTTAGAGGACGTGGCAGATGTAGCTATGAAGAATGATGTTTGTGAGGGAGTGACTGATCTGAAGAAGTTCACGAGCAATGCTTTGGCTTTGGTTAATACTTATGCTGCTAATGGGATTCCATAG 633 0.4929 MSTHTRRPLPFVFFILSATSLFLHPIPTVAYLDPTDSDATDFIRTNCNTTLYPDLCYTSLSRYASAIQQSNGQLARVAIGVSLIKARHMAAYISNMTREAEYGLDSRAVSALHDCSSNLGDAVDEIHGSLKQMRQLGAAGSGTESFRFQMSNVQTWMSAALTDEETCTDGLEDVADVAMKNDVCEGVTDLKKFTSNALALVNTYAANGIP* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00829 210 NCBIfam pectinesterase inhibitor domain 16 204 IPR006501 GO:0004857
Pte6g00829 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 204 IPR035513 -
Pte6g00829 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 204 IPR035513 -
Pte6g00829 210 CDD PMEI-like_3 47 206 - -
Pte6g00829 210 SMART PMEI_2 38 200 IPR006501 GO:0004857
Pte6g00829 210 Pfam Plant invertase/pectin methylesterase inhibitor 41 200 IPR006501 GO:0004857
Pte6g00829 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 200 - -
Pte6g00829 210 FunFam Pectin methylesterase inhibitor 1 38 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00829 Pte-Chr6 20563252 20563916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00829 43 201 Carbohydrate Esterase AT1G53830 25.625 1.46e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00829 - - qsa:O6P43_032527 283.878