Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00810 ATGGCATTGAGTTCTTACTACAACTGTAATGCAGTTCAGACCACACTGAATCCAGGAATAAGTCCTTTCAGTTCAAAAGAAGCAGAACTAGCATGGGAACTACTCTTCAATAATGAAGATGATGGATTTTCAGTTCCCAACTACTTGCTTGATTTCTACTATGATCCCAACAGTTTTTTCGGTTCTGATATATGTCCACATCTTCTGCCACCCACATTTCCACGTGAACTCCTCATGTCTTTCTCCCCAGAAATCCTCCCACTTGGAAACTACGATGAATCCCTTGCACATCCAAAACGACAGAAATGCTTCCACAATCAACAATCAGTTCCTGAATTTGAGCCAGCACTCATGGATGGATTTGTCAGGAAACCCCTTGAGAGTCTACCACAACTGGAGCTGCCTGCACTGCCCCATGAGTTCAATTTTACTTCGGAAGCTAATTATTGTTGTGAAAACACTGTAACAGACGCTTATAAGAAGGTTGAAGAGAAAGGTGTTTCGGCACAGAGTGTTTCAGCAAGAGAAAGGAGGAGGAAGATCTCTGAGAAGACTCAACAGCTTGGGAAGCTTATTCCTGGTGGAACTAAGATGAACACAATTGAGATGTTACAAGCTGCTTCCAATTACGTCAAGTACTTGCAAGCACAAGTTGGTGTTCTTGAACTTATGGACAAACTGAAGGAGAGTGGGGGTTCAGCTCCAACAGAAGATATGCAAGTCCTCCTTGCATCTTCCTCCATACAAGGAAAGCTGTACTCAAAGGAGAAGTGCATTGTTCCCAAAGATTTTGTTGCTGCCTTAGCAAATCGCCATGATGTTCAATCAAGACCGTCAATTCATGATAATCTTGTCAAGCTAATCAACAGATGA 873 0.4238 MALSSYYNCNAVQTTLNPGISPFSSKEAELAWELLFNNEDDGFSVPNYLLDFYYDPNSFFGSDICPHLLPPTFPRELLMSFSPEILPLGNYDESLAHPKRQKCFHNQQSVPEFEPALMDGFVRKPLESLPQLELPALPHEFNFTSEANYCCENTVTDAYKKVEEKGVSAQSVSARERRRKISEKTQQLGKLIPGGTKMNTIEMLQAASNYVKYLQAQVGVLELMDKLKESGGSAPTEDMQVLLASSSIQGKLYSKEKCIVPKDFVAALANRHDVQSRPSIHDNLVKLINR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00810 290 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 169 260 IPR045843 GO:0003700|GO:0006355
Pte6g00810 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
Pte6g00810 290 Pfam Helix-loop-helix DNA-binding domain 175 215 IPR011598 GO:0046983
Pte6g00810 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 223 IPR036638 GO:0046983
Pte6g00810 290 Gene3D - 164 231 IPR036638 GO:0046983
Pte6g00810 290 SMART finulus 171 220 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00810 Pte-Chr6 19798860 19801962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00810 58 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 33.607 2.39e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte6g00810 HLH 9.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00810 - - qlo:115983385 197.978