Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00798 ATGGGTAGTCTTTGTAGTAGAAGCAGAAATTCAGAGCGTGAATCCAATGATTACAAAACAGGTGCTGGTGGCGCAGTGGGCTATCAGAAAACCCATGAGCCTGTAGCTAATCCATCTTACGCCCCAGCTCAGCAATTCAACCAATTACCTCAGAAACCTGCTGTGTCCGTACAGACAGTTCCATGGAAGCCATCTGCTCCTAGCCAAAAATCTTCTCTTAATCCAGATACCATTTTGGGTAAACCATATGAAGATGTGAAGCAACACTACAGCATTGGCAAAGAATTGGGTAGAGGTCAATTTGGGGTGACGTACCTTTGTACTGAGAATTCAACTGCAAGGCAATATGCTTGCAAGTCTATCTCAAAGAGAAAGCTAATAACTAAGAGTGATAAGGAAGATATGAGGAGAGAGATTCACATTATGCAACACATGAGTGGGCAATCCAACATTGTGGAGTTTAAAGGGGCCTACGAGGATAAACAATCTGTTCATCTGGTGATGGAGTTATGTGCAGGAGGTGAGCTCTTCGATAGGATTATTGCCAAGGGGCATTACAGTGAACGGGCTGCTTCTTCAATAATCAGGCAGATCGTTAATGTTGTTCACATCTGCCACTTTATGGGTGTCATGCATAGAGATCTCAAGCCTGAGAATTTCTTGTTGTCCAGCAAGGACGAGCATGCCCTCCTAAAGGCAACGGATTTTGGATTGTCAGTTTTCATTGACGAAGGGAAGGTCTACCGAGATATTGTTGGAAGTGCTTACTATGTTGCTCCTGAAGTTCTAAGGCGTAGATACGGGAAAGAAATAGATATATGGAGTGCTGGAGTAATGCTGTATATCTTACTGAGTGGTGTACCTCCATTTTGGGCAGAGACGGAGAAGGGAATATTTGATGCCATATTAGAAGGACACATTGATTTTGAAAGCAAACCGTGGCCATCTATTTCAAGAAGTGCCAAGGATCTTGTACAGAAGATGCTCACACAAGACCCAACGAAACGAATTACTGCTGCTCAAGTCCTAGAGCATCCATGGCTCAAGGAAGGTGGAGATGCATCAGACAAACCTATTGACAGTGCTGTCTTGTCTAGAATGAAGCAATTCAGAGCAATGAATAAACTCAAGCAGCTCGCATTGAAGGTCATTGCAGAAAACCTTTCCAAAGAAGAGATCCAAGGGCTGAAGTCTATGTTTGCGAACATGGACACTGATAACAGTGGTACCATCACATATGAAGAACTCAAGGCTGGATTAGCTCAGCTTGGCTCAAAGCTTACAGAGGCTGAGGTCAAGCAGCTGATGGAAGCAGCAGATGTGGATGGAAATGGGTCAATTGACTACATTGAATTTATTACGGCTACAATGCATAGGCATAGGCTTGAAAGAGATGAGCATCTGTACAAAGCGTTCCAATATTTTGACAAGGATAACAGTGGGTAA 1446 0.4343 MGSLCSRSRNSERESNDYKTGAGGAVGYQKTHEPVANPSYAPAQQFNQLPQKPAVSVQTVPWKPSAPSQKSSLNPDTILGKPYEDVKQHYSIGKELGRGQFGVTYLCTENSTARQYACKSISKRKLITKSDKEDMRREIHIMQHMSGQSNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAASSIIRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEHALLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVMLYILLSGVPPFWAETEKGIFDAILEGHIDFESKPWPSISRSAKDLVQKMLTQDPTKRITAAQVLEHPWLKEGGDASDKPIDSAVLSRMKQFRAMNKLKQLALKVIAENLSKEEIQGLKSMFANMDTDNSGTITYEELKAGLAQLGSKLTEAEVKQLMEAADVDGNGSIDYIEFITATMHRHRLERDEHLYKAFQYFDKDNSG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00798 481 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Pte6g00798 481 SMART efh_1 431 459 IPR002048 GO:0005509
Pte6g00798 481 SMART efh_1 395 423 IPR002048 GO:0005509
Pte6g00798 481 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Pte6g00798 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Pte6g00798 481 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
Pte6g00798 481 MobiDBLite consensus disorder prediction 61 76 - -
Pte6g00798 481 Coils Coil 413 433 - -
Pte6g00798 481 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Pte6g00798 481 ProSiteProfiles Protein kinase domain profile. 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00798 481 Gene3D - 389 457 - -
Pte6g00798 481 Gene3D - 367 481 - -
Pte6g00798 481 SUPERFAMILY EF-hand 372 481 IPR011992 -
Pte6g00798 481 Pfam EF-hand domain pair 396 456 IPR002048 GO:0005509
Pte6g00798 481 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Pte6g00798 481 Gene3D Transferase(Phosphotransferase) domain 1 176 366 - -
Pte6g00798 481 CDD EFh 396 455 IPR002048 GO:0005509
Pte6g00798 481 MobiDBLite consensus disorder prediction 1 39 - -
Pte6g00798 481 FunFam calcium-dependent protein kinase 1 176 355 - -
Pte6g00798 481 FunFam Calcium-dependent protein kinase 1 92 175 - -
Pte6g00798 481 ProSitePatterns EF-hand calcium-binding domain. 404 416 IPR018247 -
Pte6g00798 481 FunFam calcium-dependent protein kinase SK5 385 457 - -
Pte6g00798 481 SMART serkin_6 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00798 481 MobiDBLite consensus disorder prediction 60 80 - -
Pte6g00798 481 SUPERFAMILY Protein kinase-like (PK-like) 88 357 IPR011009 -
Pte6g00798 481 CDD STKc_CAMK 89 347 - -
Pte6g00798 481 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00798 481 ProSiteProfiles EF-hand calcium-binding domain profile. 463 481 IPR002048 GO:0005509
Pte6g00798 481 PANTHER SERINE/THREONINE-PROTEIN KINASE 84 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00798 Pte-Chr6 19294405 19298321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00798 38 481 EF-hand Containing Proteins AT3G20410 79.778 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte6g00798 Pkinase 1.5e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00798 K13412 - qsu:111998297 787.719